Factsheet for PGSC0003DMT400004095

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400001613

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	PGSC0003DMT400001613	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g110520.2.1	Tomato	nucleus, plastid	96.56	97.23
KRH24354	Soybean	nucleus, plastid	75.56	77.56
KRH24353	Soybean	cytosol, plastid	16.7	76.98
CDY46205	Canola	plastid	72.98	75.99
KRH39820	Soybean	nucleus, plastid	74.35	75.39
AT4G34740.1	Thale cress	plastid	72.29	74.87
AT2G16570.1	Thale cress	plastid	72.46	74.38
VIT_03s0038g00880.t01	Wine grape	plastid	74.18	74.06
KRH39819	Soybean	plastid	64.89	73.78
CDY42591	Canola	cytosol	60.07	72.11
CDY41949	Canola	cytosol	59.55	71.93
KRH60750	Soybean	extracellular, plastid	70.22	71.7
CDY61829	Canola	cytosol, plastid	73.49	70.35
PGSC0003DMT400089372	Potato	plastid	66.78	70.04
AT4G38880.1	Thale cress	plastid	61.1	66.73
GSMUA_Achr3P22240_001	Banana	cytosol	50.95	66.07
GSMUA_Achr4P16330_001	Banana	cytosol	54.04	63.95
Zm00001d010197_P001	Maize	plastid	54.91	59.07
GSMUA_AchrUn_...	Banana	plastid	54.39	58.96
Os05t0430800-01	Rice	plastid	54.73	58.78
TraesCS3D01G376600.1	Wheat	plastid	55.42	58.76
Zm00001d038332_P001	Maize	plastid	54.91	58.75
EES18281	Sorghum	plastid	54.73	58.56
Zm00001d042673_P001	Maize	plastid	54.22	57.9
TraesCS3A01G383500.1	Wheat	plastid	54.39	57.45
OQU87957	Sorghum	plastid	54.04	57.4
TraesCS1B01G279800.1	Wheat	plastid	54.04	57.4
TraesCS3B01G415900.1	Wheat	plastid	53.7	57.25
TraesCS1D01G269400.1	Wheat	plastid	53.36	56.88
TraesCS1A01G269300.1	Wheat	plastid	52.67	55.94
Os01t0873100-01	Rice	plasma membrane	9.98	55.24
CDX75458	Canola	plastid	73.32	55.11
HORVU1Hr1G074460.2	Barley	plastid	53.01	54.61
HORVU3Hr1G082280.1	Barley	plastid	53.7	50.73
Bra011557.1-P	Field mustard	plastid	9.47	25.58

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	EntrezGene:102598888	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1
MEROPS:C44.001	InterPro:GATase_2_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004044	GO:GO:0005488
GO:GO:0006139	GO:GO:0006164	GO:GO:0006189	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009113	GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0046872
GO:GO:0051536	InterPro:IPR017932	InterPro:IPR029055	UniProt:M0ZMW1	HAMAP:MF_01931	InterPro:Ntn_hydrolases_N
PFAM:PF00156	PFAM:PF13537	EnsemblPlantsGene:PGSC0003DMG400001618	PGSC:PGSC0003DMG400001618	EnsemblPlants:PGSC0003DMT400004095	PIRSF:PIRSF000485
InterPro:PRTase-like	InterPro:PRibTrfase_dom	PFscan:PS51278	PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	InterPro:PurF
InterPro:PurF_N	SUPFAM:SSF53271	SUPFAM:SSF56235	TIGRFAMs:TIGR01134	UniParc:UPI0002958651	RefSeq:XP_006359610.1
SEG:seg	:	:	:	:	:

Description

Amidophosphoribosyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400001618]

Coordinates

chr1:-:86902852..86905000

Molecular Weight (calculated)

62839.0 Da

IEP (calculated)

6.564

GRAVY (calculated)

-0.068

Length

581 amino acids

Sequence
(BLAST)

001: MAAAAVSTAS SAAVTNKSHL SSSLDKPFSS PSQKLLSLAA KTLPKPYHHH HRTLITAASK NPLTDVVSSK PNPDGHSFDS YFDDDDKPRE ECGVVGIYGD
101: SEASRLCYLA LHALQHRGQE GAGIVCVNDN VLKSITGVGL VSDVFSESKL GQLPGDLAIG HVRYSTAGSS MLKNVQPFVA SYRFGSVGVA HNGNLVNYKQ
201: LRNELEENGS IFNTSSDTEV VLHLIAISKA RPFLLRIVEA CEKIEGAYSM VFATEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: LPGEVVVVDK EGVQSICLMP HPEPKSCIFE HIYFALPNSV VFGRSVYESR RAFGEILATE APVECDVVIA VPDSGVVAAL GYAAKAGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRAVLEGK RVVVVDDSIV RGTTSSKIVR LLKEAGAKEV HMRIASPPII ASCYYGVDTP SSEELISNRM SVEEIREYIG
501: SDSLAFLPIE SLNKMLGSDS KSYCYACFSG NYPVEPTGKV KRIGDFMDDG LSGDMDSIDG GWLPGSSKVQ KKTILNEVRT S

Best Arabidopsis Sequence Match ( AT4G34740.1 )
(BLAST)

001: MAATSSISSS LSLNAKPNKL SNNNNNNKPH RFLRNPFLNP SSSSFSPLPA SISSSSSSPS FPLRVSNPLT LLAADNDDYD EKPREECGVV GIYGDSEASR
101: LCYLALHALQ HRGQEGAGIV TVSKDKVLQT ITGVGLVSEV FSESKLDQLP GDIAIGHVRY STAGSSMLKN VQPFVAGYRF GSVGVAHNGN LVNYTKLRAD
201: LEENGSIFNT SSDTEVVLHL IAISKARPFF MRIVDACEKL QGAYSMVFVT EDKLVAVRDP HGFRPLVMGR RSNGAVVFAS ETCALDLIEA TYEREVYPGE
301: VLVVDKDGVK CQCLMPHPEP KQCIFEHIYF SLPNSIVFGR SVYESRHVFG EILATESPVD CDVVIAVPDS GVVAALGYAA KAGVAFQQGL IRSHYVGRTF
401: IEPSQKIRDF GVKLKLSPVR GVLEGKRVVV VDDSIVRGTT SSKIVRLLRE AGAKEVHMRI ASPPIIASCY YGVDTPSSNE LISNRMSVDE IRDYIGCDSL
501: AFLSFETLKK HLGEDSRSFC YACFTGDYPV KPTEDKVKRG GDFIDDGLVG GIHNIEGGWV R

Arabidopsis Description

ASE2Amidophosphoribosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UYQ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.