CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY24170
CDY36943

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	CDY24170	AT3G47620.1	21798944
AT4G34740.1	CDY36943	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011558.1-P	Field mustard	plastid	65.72	91.53
AT4G34740.1	Thale cress	plastid	61.32	84.49
CDY46205	Canola	plastid	59.12	81.9
CDY61829	Canola	cytosol, plastid	60.28	76.77
Solyc01g110520.2.1	Tomato	nucleus, plastid	55.11	73.83
PGSC0003DMT400004095	Potato	plastid	55.11	73.32
VIT_03s0038g00880.t01	Wine grape	plastid	54.98	73.02
CDY42591	Canola	cytosol	44.24	70.66
CDY41949	Canola	cytosol	43.47	69.85
Solyc01g088360.2.1	Tomato	plastid	48.9	68.6
PGSC0003DMT400089372	Potato	plastid	48.25	67.33
GSMUA_Achr3P22240_001	Banana	cytosol	37.77	65.18
GSMUA_Achr4P16330_001	Banana	cytosol	40.62	63.95
EES18281	Sorghum	plastid	42.56	60.59
Zm00001d010197_P001	Maize	plastid	42.3	60.56
Zm00001d038332_P001	Maize	plastid	42.43	60.41
CDY45330	Canola	mitochondrion	13.07	59.76
Os05t0430800-01	Rice	plastid	41.27	58.96
Zm00001d042673_P001	Maize	plastid	41.14	58.46
GSMUA_AchrUn_...	Banana	plastid	40.49	58.4
TraesCS3D01G376600.1	Wheat	plastid	41.14	58.03
TraesCS3B01G415900.1	Wheat	plastid	40.75	57.8
TraesCS1A01G269300.1	Wheat	plastid	40.88	57.77
OQU87957	Sorghum	plastid	40.75	57.59
TraesCS3A01G383500.1	Wheat	plastid	40.88	57.45
TraesCS1B01G279800.1	Wheat	plastid	40.62	57.4
TraesCS1D01G269400.1	Wheat	plastid	40.36	57.25
Os01t0873100-01	Rice	plasma membrane	7.63	56.19
HORVU1Hr1G074460.2	Barley	plastid	40.49	55.5
HORVU3Hr1G082280.1	Barley	plastid	40.75	51.22

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	Gene3D:3.30.300.20	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1
GO:A0A078CK50	EnsemblPlants:CDX75458	ProteinID:CDX75458	ProteinID:CDX75458.1	InterPro:GATase_2_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004044	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006164	GO:GO:0006364	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009113	GO:GO:0009116	GO:GO:0009507	GO:GO:0009532	GO:GO:0009536	GO:GO:0009570
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00121352001	InterPro:IPR015946
InterPro:IPR017932	InterPro:IPR029055	InterPro:KH_dom-like_a/b	HAMAP:MF_00003	HAMAP:MF_01931	InterPro:Ntn_hydrolases_N
PFAM:PD007327	PFAM:PF00156	PFAM:PF02033	PFAM:PF13537	InterPro:PRTase-like	InterPro:PRibTrfase_dom
ScanProsite:PS01319	PFscan:PS51278	PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	MetaCyc:PWY-6121	MetaCyc:PWY-6122
MetaCyc:PWY-6277	MetaCyc:PWY-7282	InterPro:PurF	InterPro:PurF_N	InterPro:RbfA	InterPro:RbfA_dom_sf
InterPro:Ribosome-bd_factorA_CS	SUPFAM:SSF53271	SUPFAM:SSF56235	SUPFAM:SSF89919	TIGRFAMs:TIGR00082	TIGRFAMs:TIGR01134
UniPathway:UPA00074	UniParc:UPI0004EDD07A	SEG:seg	:	:	:

Description

BnaA01g02440D

Coordinates

chrLK031804:-:1177874..1181551

Molecular Weight (calculated)

84420.9 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.153

Length

773 amino acids

Sequence
(BLAST)

001: MAATSCFSSS ISLNAKPNKP SKAPLRFLRS PFLKPSFSPL PASLSSSSPS LPVKVSSSGN ANHPLALEND DYDEKPREEC GVVGIYGDSE ASRLCYLALH
101: ALQHRGQEGA GIVTVSKDKV LQTITGVGLV SEVFNESKLD QLPGDIAIGH VRYSTAGSSM LKNVQPFVAG YRFGSVGVAH NGNLVNYTKL RAELEENGSI
201: FNTSSDTEVV LHLIAISKAR PFFMRIVDAC EKLQGAYSMV FVTEDKLVAV RDPHGFRPLV MGRRSNGAVV FASETCALDL IEATYEREVY PGEVLVVDKD
301: GVKSQCLMPH PEPKQCIFEH IYFSLPNSIV FGRSVYESRH VFGEILATES PVDCDVVIAV PDSGVVAALG YAAKSGVAFQ QGLIRSHYVG RTFIEPSQKI
401: RDFGVKLKLS PVRGVLEGKR VVVVDDSIVR GTTSSKIVRL LREAGAKEVH MRIASPPIVA SCYYGVDTPS SEELISNRMS VDEVRDYIGS DSLAFLSFET
501: LKKHLGEDSK TFCYACFTGN YPVKPTEDKV KRGGGDFIDD GLVGGINNIE GGWDPTVAMA NVFHAHQSHL FFPLNPSIST VRSKTQAFHF PQSTAPANLR
601: TSLSVRRRSV KCMANPRRVK MVAKQIMREL SDMLLTDTVL QHAVLPEAAL GADRYLSSLT TISDVEVSND LQIVKVYVSV FGDDRGKDVA IAGLKSKAKY
701: VRSELGKRMK LRLTPEVRFI EDESMERGSR VLAILDKIKA EKGSEGGAET SDSPEDDQDW GVDDPDEDII YVK

Best Arabidopsis Sequence Match ( AT4G34740.1 )
(BLAST)

001: MAATSSISSS LSLNAKPNKL SNNNNNNKPH RFLRNPFLNP SSSSFSPLPA SISSSSSSPS FPLRVSNPLT LLAADNDDYD EKPREECGVV GIYGDSEASR
101: LCYLALHALQ HRGQEGAGIV TVSKDKVLQT ITGVGLVSEV FSESKLDQLP GDIAIGHVRY STAGSSMLKN VQPFVAGYRF GSVGVAHNGN LVNYTKLRAD
201: LEENGSIFNT SSDTEVVLHL IAISKARPFF MRIVDACEKL QGAYSMVFVT EDKLVAVRDP HGFRPLVMGR RSNGAVVFAS ETCALDLIEA TYEREVYPGE
301: VLVVDKDGVK CQCLMPHPEP KQCIFEHIYF SLPNSIVFGR SVYESRHVFG EILATESPVD CDVVIAVPDS GVVAALGYAA KAGVAFQQGL IRSHYVGRTF
401: IEPSQKIRDF GVKLKLSPVR GVLEGKRVVV VDDSIVRGTT SSKIVRLLRE AGAKEVHMRI ASPPIIASCY YGVDTPSSNE LISNRMSVDE IRDYIGCDSL
501: AFLSFETLKK HLGEDSRSFC YACFTGDYPV KPTEDKVKRG GDFIDDGLVG GIHNIEGGWV R

Arabidopsis Description

ASE2Amidophosphoribosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UYQ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.