Factsheet for TraesCS3D01G376600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G306500.1
TraesCS6B01G334900.1
TraesCS6D01G285600.1
TraesCS7B01G091900.1
TraesCS7D01G187600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	TraesCS6A01G306500.1	AT3G47620.1	21798944
AT4G34740.1	TraesCS6B01G334900.1	AT3G47620.1	21798944
AT4G34740.1	TraesCS6D01G285600.1	AT3G47620.1	21798944
AT4G34740.1	TraesCS7B01G091900.1	AT3G47620.1	21798944
AT4G34740.1	TraesCS7D01G187600.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G383500.1	Wheat	plastid	93.98	93.64
HORVU3Hr1G082280.1	Barley	plastid	91.06	81.14
Zm00001d042673_P001	Maize	plastid	79.93	80.51
OQU87957	Sorghum	plastid	78.47	78.61
TraesCS1D01G269400.1	Wheat	plastid	75.18	75.6
Os01t0873100-01	Rice	plasma membrane	14.05	73.33
GSMUA_Achr3P22240_001	Banana	cytosol	56.2	68.75
GSMUA_Achr4P16330_001	Banana	cytosol	60.4	67.41
GSMUA_AchrUn_...	Banana	plastid	61.31	62.69
CDY41949	Canola	cytosol	52.37	59.67
CDY42591	Canola	cytosol	52.55	59.5
Bra001980.1-P	Field mustard	plastid	58.76	57.81
KRH39819	Soybean	plastid	53.28	57.14
KRH60750	Soybean	extracellular, plastid	59.12	56.94
CDY46205	Canola	plastid	57.48	56.45
AT2G16570.1	Thale cress	plastid	58.21	56.36
Bra011558.1-P	Field mustard	plastid	56.93	56.22
KRH24353	Soybean	cytosol, plastid	12.77	55.56
AT4G34740.1	Thale cress	plastid	56.75	55.44
PGSC0003DMT400004095	Potato	plastid	58.76	55.42
KRH24354	Soybean	nucleus, plastid	57.12	55.3
AT4G38880.1	Thale cress	plastid	53.65	55.26
Solyc01g110520.2.1	Tomato	nucleus, plastid	58.03	55.11
VIT_03s0038g00880.t01	Wine grape	plastid	58.03	54.64
KRH39820	Soybean	nucleus, plastid	57.12	54.62
Bra011888.1-P	Field mustard	plastid	53.1	53.59
PGSC0003DMT400089372	Potato	plastid	54.01	53.43
Solyc01g088360.2.1	Tomato	plastid	53.65	53.36
CDY61829	Canola	cytosol, plastid	56.93	51.4
CDX75458	Canola	plastid	58.03	41.14
CDY45330	Canola	mitochondrion	11.68	37.87
Bra011557.1-P	Field mustard	plastid	11.31	28.84

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1	InterPro:GATase_2_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004044	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009113	GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	InterPro:IPR017932
InterPro:IPR029055	HAMAP:MF_01931	InterPro:Ntn_hydrolases_N	PFAM:PF00156	PFAM:PF13537	PIRSF:PIRSF000485
InterPro:PRTase-like	InterPro:PRibTrfase_dom	PFscan:PS51278	PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	InterPro:PurF
InterPro:PurF_N	SUPFAM:SSF53271	SUPFAM:SSF56235	TIGRFAMs:TIGR01134	EnsemblPlantsGene:TraesCS3D01G376600	EnsemblPlants:TraesCS3D01G376600.1
TIGR:cd00715	TIGR:cd06223	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:-:490303896..490305542

Molecular Weight (calculated)

58799.2 Da

IEP (calculated)

6.505

GRAVY (calculated)

-0.078

Length

548 amino acids

Sequence
(BLAST)

001: MAAAAAATAA PPATPSSRPL RMPPAPSTVH PQLRCHAGPS PSLLALRHRA ARAAPARALL DKATPFNFGD GEEDDGDDHP REECGVFGVV GDPEASSLCY
101: LGLQKLQHRG EEGAGICAAG DDGKLKSVTG LGLVSDVFRD PAHLGSLPGK AAIGHVRYST SGGQAQLCNV QPFLAGYRFG QLAVAHNGNL VNYLPLRHKL
201: EAQGSIFNNS SDTEVILHLI ATSLSRPLLA RICDACERLQ GAYSLLFLTA DKLFAVRDPF GFRPLVMGRR PNGAVVFASE TCALDLIDAV YEREVEPGEV
301: IVVDRRDMSV SSACLVPHRP RKSCVFEHIY FALPNSIVFG HAVHERRTAY GRALAEESPA PTADVVIPVP DSGFYAALGF AQASGLEFQQ GLIRSHYTGR
401: SFIQPTQAIR DLAVKLKLAP VRGVITGKSV VVVDDSIVRG TTSSKIVRLL RDAGAREVHM RISSPPVVGR CHYGIDTPDE KELISNRLDV EGVREMIGCD
501: SLGFLTLDKL HSIYGDEADE LCDACFSRNY PVPMPDKVPA MASADDED

Best Arabidopsis Sequence Match ( AT4G34740.1 )
(BLAST)

001: MAATSSISSS LSLNAKPNKL SNNNNNNKPH RFLRNPFLNP SSSSFSPLPA SISSSSSSPS FPLRVSNPLT LLAADNDDYD EKPREECGVV GIYGDSEASR
101: LCYLALHALQ HRGQEGAGIV TVSKDKVLQT ITGVGLVSEV FSESKLDQLP GDIAIGHVRY STAGSSMLKN VQPFVAGYRF GSVGVAHNGN LVNYTKLRAD
201: LEENGSIFNT SSDTEVVLHL IAISKARPFF MRIVDACEKL QGAYSMVFVT EDKLVAVRDP HGFRPLVMGR RSNGAVVFAS ETCALDLIEA TYEREVYPGE
301: VLVVDKDGVK CQCLMPHPEP KQCIFEHIYF SLPNSIVFGR SVYESRHVFG EILATESPVD CDVVIAVPDS GVVAALGYAA KAGVAFQQGL IRSHYVGRTF
401: IEPSQKIRDF GVKLKLSPVR GVLEGKRVVV VDDSIVRGTT SSKIVRLLRE AGAKEVHMRI ASPPIIASCY YGVDTPSSNE LISNRMSVDE IRDYIGCDSL
501: AFLSFETLKK HLGEDSRSFC YACFTGDYPV KPTEDKVKRG GDFIDDGLVG GIHNIEGGWV R

Arabidopsis Description

ASE2Amidophosphoribosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178UYQ3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.