Factsheet for GSMUA_Achr4P16330_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P00500_001
GSMUA_Achr6P02720_001
GSMUA_Achr7P17990_001
GSMUA_Achr7P20990_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	GSMUA_Achr4P00500_001	AT3G47620.1	21798944
AT4G34740.1	GSMUA_Achr6P02720_001	AT3G47620.1	21798944
AT4G34740.1	GSMUA_Achr7P17990_001	AT3G47620.1	21798944
AT4G34740.1	GSMUA_Achr7P20990_001	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22240_001	Banana	cytosol	74.95	82.14
GSMUA_AchrUn_...	Banana	plastid	78.41	71.83
Os01t0873100-01	Rice	plasma membrane	13.44	62.86
EES18281	Sorghum	plastid	69.25	62.62
Os05t0430800-01	Rice	plastid	68.64	62.29
Zm00001d010197_P001	Maize	plastid	68.43	62.22
Zm00001d042673_P001	Maize	plastid	68.84	62.13
TraesCS1D01G269400.1	Wheat	plastid	68.84	62.02
TraesCS1A01G269300.1	Wheat	plastid	68.84	61.79
Zm00001d038332_P001	Maize	plastid	68.23	61.69
OQU87957	Sorghum	plastid	68.64	61.61
TraesCS1B01G279800.1	Wheat	plastid	68.43	61.43
TraesCS3B01G415900.1	Wheat	plastid	67.41	60.73
TraesCS3D01G376600.1	Wheat	plastid	67.41	60.4
TraesCS3A01G383500.1	Wheat	plastid	67.21	60.0
HORVU1Hr1G074460.2	Barley	plastid	68.23	59.4
KRH39819	Soybean	plastid	59.88	57.53
CDY41949	Canola	cytosol	56.01	57.17
CDY42591	Canola	cytosol	56.01	56.82
CDY46205	Canola	plastid	64.36	56.63
KRH24354	Soybean	nucleus, plastid	65.17	56.54
Bra011558.1-P	Field mustard	plastid	63.75	56.4
Bra001980.1-P	Field mustard	plastid	63.95	56.37
KRH39820	Soybean	nucleus, plastid	64.97	55.67
KRH24353	Soybean	cytosol, plastid	14.26	55.56
AT4G34740.1	Thale cress	plastid	63.34	55.44
AT2G16570.1	Thale cress	plastid	63.54	55.12
KRH60750	Soybean	extracellular, plastid	63.54	54.83
Solyc01g110520.2.1	Tomato	nucleus, plastid	63.95	54.42
VIT_03s0038g00880.t01	Wine grape	plastid	64.36	54.3
PGSC0003DMT400004095	Potato	plastid	63.95	54.04
HORVU3Hr1G082280.1	Barley	plastid	66.6	53.17
AT4G38880.1	Thale cress	plastid	57.23	52.82
PGSC0003DMT400089372	Potato	plastid	59.27	52.53
Solyc01g088360.2.1	Tomato	plastid	58.45	52.09
CDY61829	Canola	cytosol, plastid	63.54	51.4
Bra011888.1-P	Field mustard	plastid	56.82	51.38
CDY45330	Canola	mitochondrion	14.05	40.83
CDX75458	Canola	plastid	63.95	40.62
Bra011557.1-P	Field mustard	plastid	11.41	26.05

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1	InterPro:GATase_2_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004044	GO:GO:0005488	GO:GO:0006139	GO:GO:0006164
GO:GO:0006189	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009113	GO:GO:0009116
GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0046872	GO:GO:0051536	EnsemblPlantsGene:GSMUA_Achr4G16330_001
EnsemblPlants:GSMUA_Achr4P16330_001	EnsemblPlants:GSMUA_Achr4T16330_001	InterPro:IPR017932	InterPro:IPR029055	UniProt:M0SPE7	HAMAP:MF_01931
InterPro:Ntn_hydrolases_N	PFAM:PF13537	PIRSF:PIRSF000485	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PFscan:PS51278
PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	InterPro:PurF	InterPro:PurF_N	SUPFAM:SSF53271	SUPFAM:SSF56235
TIGRFAMs:TIGR01134	UniParc:UPI000294BE55	SEG:seg	:	:	:

Description

Amidophosphoribosyltransferase, chloroplastic (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr4G16330_001]

Coordinates

chr4:-:14577428..14579181

Molecular Weight (calculated)

52326.6 Da

IEP (calculated)

6.233

GRAVY (calculated)

0.131

Length

491 amino acids

Sequence
(BLAST)

001: MLPLTPHAAL VDPSHAFLSA DEDKPRDECG VVGIIGDPDA AQLCSLALHA LQHRGQEGAG IVSSDGSSLH SATGLGLVSE VFSDPGTLAP LVGEASIGHV
101: RYSTAGAASS LANVQPFVAG YRFGKLAVAH NGNLVNYRNL RSALESKGSI FNSSSDTEVI LHLIATSSSR PLLARIVEAC EALEGAYSLV FLTANKLFAV
201: RDPHGFRPLV MGRRRPTGAI VFASETCALD LINAAFVREV NPGEVVVVDS RDMSITSLCL MPSKSRKACV FEHVYFALPN SVVFGHPVHS SRYSFGAALA
301: RESPAPSADI VIPVPDSGFF AALGFAEASG LPFRQGLIRS HYVGRTFIEP DKEGRNLAVK LKLAPVRGIL EGKSVVVVDD SIVRGTTSSK IVQLIKTAGG
401: AREVHMRIAS PPIVGSCYYG VDTPSSEELI SNRMDVEGVR QEIGCESLAF LSLESLRGVF ADEAHMFCDA CFTRDYPVPP RNQEIEQLVE V

Best Arabidopsis Sequence Match ( AT2G16570.1 )
(BLAST)

001: MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS YFSSPSPSED NSHTPFDYHN DEDDEKPREE CGVVGIYGDP
101: EASRLCYLAL HALQHRGQEG AGIVTVSPEK VLQTITGVGL VSEVFNESKL DQLPGEFAIG HVRYSTAGAS MLKNVQPFVA GYRFGSIGVA HNGNLVNYKT
201: LRAMLEENGS IFNTSSDTEV VLHLIAISKA RPFFMRIIDA CEKLQGAYSM VFVTEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: YPGEVLVVDK DGVKSQCLMP KFEPKQCIFE HIYFSLPNSI VFGRSVYESR HVFGEILATE SPVECDVVIA VPDSGVVAAL GYAAKSGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRGVLEGK RVVVVDDSIV RGTTSSKIVR LLREAGAKEV HMRIASPPIV ASCYYGVDTP SSEELISNRL SVEEINEFIG
501: SDSLAFLSFD TLKKHLGKDS KSFCYACFTG DYPVKPTEVK VKRGGGDFID DGLVGSFENI EAGWVR

Arabidopsis Description

ASE1Amidophosphoribosyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.