Factsheet for TraesCS3B01G415900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G306500.1
TraesCS6B01G334900.1
TraesCS6D01G285600.1
TraesCS7B01G091900.1
TraesCS7D01G187600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	TraesCS6A01G306500.1	AT3G47620.1	21798944
AT4G34740.1	TraesCS6B01G334900.1	AT3G47620.1	21798944
AT4G34740.1	TraesCS6D01G285600.1	AT3G47620.1	21798944
AT4G34740.1	TraesCS7B01G091900.1	AT3G47620.1	21798944
AT4G34740.1	TraesCS7D01G187600.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G082280.1	Barley	plastid	92.29	81.79
Zm00001d042673_P001	Maize	plastid	80.92	81.07
OQU87957	Sorghum	plastid	80.0	79.71
Os01t0873100-01	Rice	plasma membrane	14.68	76.19
TraesCS1B01G279800.1	Wheat	plastid	75.78	75.5
GSMUA_Achr3P22240_001	Banana	cytosol	56.33	68.53
GSMUA_Achr4P16330_001	Banana	cytosol	60.73	67.41
GSMUA_AchrUn_...	Banana	plastid	61.28	62.31
CDY41949	Canola	cytosol	52.84	59.88
CDY42591	Canola	cytosol	52.48	59.09
KRH39819	Soybean	plastid	53.21	56.75
Bra001980.1-P	Field mustard	plastid	57.98	56.73
KRH60750	Soybean	extracellular, plastid	58.9	56.41
Bra011558.1-P	Field mustard	plastid	56.88	55.86
KRH24353	Soybean	cytosol, plastid	12.84	55.56
AT2G16570.1	Thale cress	plastid	57.43	55.3
KRH24354	Soybean	nucleus, plastid	57.25	55.12
AT4G34740.1	Thale cress	plastid	56.7	55.08
CDY46205	Canola	plastid	56.33	55.02
AT4G38880.1	Thale cress	plastid	53.58	54.89
KRH39820	Soybean	nucleus, plastid	56.7	53.93
VIT_03s0038g00880.t01	Wine grape	plastid	57.43	53.78
Bra011888.1-P	Field mustard	plastid	53.58	53.78
Solyc01g110520.2.1	Tomato	nucleus, plastid	56.88	53.73
PGSC0003DMT400004095	Potato	plastid	57.25	53.7
Solyc01g088360.2.1	Tomato	plastid	53.76	53.18
PGSC0003DMT400089372	Potato	plastid	53.95	53.07
CDY61829	Canola	cytosol, plastid	56.51	50.74
CDX75458	Canola	plastid	57.8	40.75
CDY45330	Canola	mitochondrion	11.74	37.87
Bra011557.1-P	Field mustard	plastid	11.56	29.3

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1	InterPro:GATase_2_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004044	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009113	GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	InterPro:IPR017932
InterPro:IPR029055	HAMAP:MF_01931	InterPro:Ntn_hydrolases_N	PFAM:PF00156	PFAM:PF13537	PIRSF:PIRSF000485
InterPro:PRTase-like	InterPro:PRibTrfase_dom	PFscan:PS51278	PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	InterPro:PurF
InterPro:PurF_N	SUPFAM:SSF53271	SUPFAM:SSF56235	TIGRFAMs:TIGR01134	EnsemblPlantsGene:TraesCS3B01G415900	EnsemblPlants:TraesCS3B01G415900.1
TIGR:cd00715	TIGR:cd06223	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3B:-:652495933..652497570

Molecular Weight (calculated)

58612.0 Da

IEP (calculated)

6.416

GRAVY (calculated)

-0.084

Length

545 amino acids

Sequence
(BLAST)

001: MAAAAAAPPA TPSSRPLRAP PAPSTVHRQL RCHAGPSPSL LALRHRAARA APARALLDKV TPFNFGEEED DGGDDHPREE CGVFGVVGDP EASSLCYLGL
101: QKLQHRGEEG AGICAAGDDG KLKSVTGLGL VSDVFRDPAH LGSLPGQAAI GHVRYSTSGG DAQLCNVQPF LAGYRFGQLA VAHNGNLVNY LPLRHKLEAQ
201: GSIFNNSSDT EVILHLIATS LSRPLLARIC DACERLQGAY SLLFLTADKL FAVRDPFGFR PLVMGRRPNG AVVFASETCA LDLIDAVYER EVEPGEVIVV
301: DRRDMSVSSA CLVPHRPRKS CVFEHIYFAL PNSIVFGHAV HERRTAYGRA LAEESPAPTA DVVIPVPDSG FYAALGFAQA SGLEFQQGLI RSHYTGRSFI
401: QPTQAIRDLA VKLKLAPVRG VITGKSVVVV DDSIVRGTTS SKIVRLLRDA GAREVHMRIS SPPVVGRCHY GIDTPDEKEL ISNRLDIEGV REMIGCDSLG
501: FLTLDKLHSI YGDEADELCD ACFSRNYPVP MPEKVPAMAS ADDED

Best Arabidopsis Sequence Match ( AT2G16570.1 )
(BLAST)

001: MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS YFSSPSPSED NSHTPFDYHN DEDDEKPREE CGVVGIYGDP
101: EASRLCYLAL HALQHRGQEG AGIVTVSPEK VLQTITGVGL VSEVFNESKL DQLPGEFAIG HVRYSTAGAS MLKNVQPFVA GYRFGSIGVA HNGNLVNYKT
201: LRAMLEENGS IFNTSSDTEV VLHLIAISKA RPFFMRIIDA CEKLQGAYSM VFVTEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: YPGEVLVVDK DGVKSQCLMP KFEPKQCIFE HIYFSLPNSI VFGRSVYESR HVFGEILATE SPVECDVVIA VPDSGVVAAL GYAAKSGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRGVLEGK RVVVVDDSIV RGTTSSKIVR LLREAGAKEV HMRIASPPIV ASCYYGVDTP SSEELISNRL SVEEINEFIG
501: SDSLAFLSFD TLKKHLGKDS KSFCYACFTG DYPVKPTEVK VKRGGGDFID DGLVGSFENI EAGWVR

Arabidopsis Description

ASE1Amidophosphoribosyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.