CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88112
EES07255

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	EER88112	AT3G47620.1	21798944
AT4G34740.1	EES07255	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042673_P001	Maize	plastid	92.5	93.01
Os01t0873100-01	Rice	plasma membrane	17.73	92.38
EES18281	Sorghum	plastid	80.26	80.85
TraesCS3A01G383500.1	Wheat	plastid	80.99	80.55
TraesCS3B01G415900.1	Wheat	plastid	79.71	80.0
TraesCS3D01G376600.1	Wheat	plastid	78.61	78.47
HORVU3Hr1G082280.1	Barley	plastid	80.62	71.71
GSMUA_Achr3P22240_001	Banana	cytosol	57.77	70.54
GSMUA_Achr4P16330_001	Banana	cytosol	61.61	68.64
GSMUA_AchrUn_...	Banana	plastid	61.97	63.25
CDY41949	Canola	cytosol	51.74	58.84
KRH39819	Soybean	plastid	54.11	57.93
CDY42591	Canola	cytosol	51.01	57.64
Bra011558.1-P	Field mustard	plastid	57.22	56.4
Bra001980.1-P	Field mustard	plastid	57.4	56.37
KRH60750	Soybean	extracellular, plastid	58.5	56.24
CDY46205	Canola	plastid	56.49	55.38
AT4G34740.1	Thale cress	plastid	56.67	55.26
KRH24354	Soybean	nucleus, plastid	56.67	54.77
AT2G16570.1	Thale cress	plastid	56.67	54.77
KRH24353	Soybean	cytosol, plastid	12.61	54.76
PGSC0003DMT400004095	Potato	plastid	57.4	54.04
AT4G38880.1	Thale cress	plastid	52.47	53.95
Solyc01g110520.2.1	Tomato	nucleus, plastid	56.86	53.9
VIT_03s0038g00880.t01	Wine grape	plastid	57.22	53.78
KRH39820	Soybean	nucleus, plastid	56.31	53.75
Bra011888.1-P	Field mustard	plastid	52.83	53.22
Solyc01g088360.2.1	Tomato	plastid	52.47	52.09
PGSC0003DMT400089372	Potato	plastid	52.65	51.99
CDY61829	Canola	cytosol, plastid	57.04	51.4
CDX75458	Canola	plastid	57.59	40.75
CDY45330	Canola	mitochondrion	11.33	36.69
Bra011557.1-P	Field mustard	plastid	10.79	27.44

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1	EntrezGene:8060995
UniProt:C5XRA7	ProteinID:EES03962.1	InterPro:GATase_2_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004044
GO:GO:0005488	GO:GO:0006139	GO:GO:0006164	GO:GO:0006189	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009113	GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757
GO:GO:0046872	GO:GO:0051536	InterPro:IPR017932	InterPro:IPR029055	HAMAP:MF_01931	InterPro:Ntn_hydrolases_N
EnsemblPlants:OQU87957	ProteinID:OQU87957	ProteinID:OQU87957.1	PFAM:PF13537	PIRSF:PIRSF000485	InterPro:PRTase-like
InterPro:PRibTrfase_dom	PFscan:PS51278	PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	MetaCyc:PWY-6121	MetaCyc:PWY-6122
MetaCyc:PWY-6277	MetaCyc:PWY-7282	InterPro:PurF	InterPro:PurF_N	EnsemblPlantsGene:SORBI_3003G372400	SUPFAM:SSF53271
SUPFAM:SSF56235	TIGRFAMs:TIGR01134	UniParc:UPI0001A852F4	RefSeq:XP_002458842.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:68769043..68773012

Molecular Weight (calculated)

59056.4 Da

IEP (calculated)

7.234

GRAVY (calculated)

-0.020

Length

547 amino acids

Sequence
(BLAST)

001: MAATAAATAA AATTSTPSTP LLRRAAAAPT TSHHYQLRCS TKPSQFVLRH RAARVAPARA LLPDRVTPFS FDADGDDHPR EECGVFGVIG DPDASSLCYL
101: GLQKLQHRGE EGAGIVASDA DGKLNSVTDL GLVGDVFRDP ARLAKLPGNA AIGHVRYSTA GASSRRNVQP FLAAYRFGQL AVAHNGNLVN YQALRNKLEA
201: QGSIFNTSSD TEVILHLIST SLSRPLLSRI CDACERLAGA YSLLFLTADK LFAVRDPFGF RPLVMGRRPN GAVVFSSETC ALDLIDATYE REVEPGEVVV
301: VDRRDMSVSY ACLVPHRPRK SCVFEHIYFA LPNSVVFGHA VHERRSAYGR ALAEESPAPT ADVVIPVPDS GFYAALGFAQ ASGLEFQQGL IRWHYSGRSF
401: IQPSQAIRDL AVKLKLAPVH GVITGKSVVV VDDSLVRGTT SSKIVRLLRD AGAREVHMRI SSPPVVGSCL YGIDTPSEGE LISNRMDLEG VRRTIGCDSL
501: AFLSLEKLHS IYGNEAHEFC DACFSRNYPV LPTVPELVPE LVSAFED

Best Arabidopsis Sequence Match ( AT2G16570.1 )
(BLAST)

001: MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS YFSSPSPSED NSHTPFDYHN DEDDEKPREE CGVVGIYGDP
101: EASRLCYLAL HALQHRGQEG AGIVTVSPEK VLQTITGVGL VSEVFNESKL DQLPGEFAIG HVRYSTAGAS MLKNVQPFVA GYRFGSIGVA HNGNLVNYKT
201: LRAMLEENGS IFNTSSDTEV VLHLIAISKA RPFFMRIIDA CEKLQGAYSM VFVTEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: YPGEVLVVDK DGVKSQCLMP KFEPKQCIFE HIYFSLPNSI VFGRSVYESR HVFGEILATE SPVECDVVIA VPDSGVVAAL GYAAKSGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRGVLEGK RVVVVDDSIV RGTTSSKIVR LLREAGAKEV HMRIASPPIV ASCYYGVDTP SSEELISNRL SVEEINEFIG
501: SDSLAFLSFD TLKKHLGKDS KSFCYACFTG DYPVKPTEVK VKRGGGDFID DGLVGSFENI EAGWVR

Arabidopsis Description

ASE1Amidophosphoribosyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.