Factsheet for GSMUA_AchrUn_randomP11710_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P00500_001
GSMUA_Achr6P02720_001
GSMUA_Achr7P17990_001
GSMUA_Achr7P20990_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	GSMUA_Achr4P00500_001	AT3G47620.1	21798944
AT4G34740.1	GSMUA_Achr6P02720_001	AT3G47620.1	21798944
AT4G34740.1	GSMUA_Achr7P17990_001	AT3G47620.1	21798944
AT4G34740.1	GSMUA_Achr7P20990_001	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22240_001	Banana	cytosol	72.39	86.61
GSMUA_Achr4P16330_001	Banana	cytosol	71.83	78.41
OQU87957	Sorghum	plastid	63.25	61.97
TraesCS3A01G383500.1	Wheat	plastid	63.43	61.82
Zm00001d038332_P001	Maize	plastid	62.5	61.69
EES18281	Sorghum	plastid	62.31	61.51
Os05t0430800-01	Rice	plastid	61.94	61.37
TraesCS3D01G376600.1	Wheat	plastid	62.69	61.31
TraesCS3B01G415900.1	Wheat	plastid	62.31	61.28
TraesCS1D01G269400.1	Wheat	plastid	62.31	61.28
Zm00001d042673_P001	Maize	plastid	62.13	61.21
Zm00001d010197_P001	Maize	plastid	61.57	61.11
TraesCS1B01G279800.1	Wheat	plastid	61.94	60.69
TraesCS1A01G269300.1	Wheat	plastid	61.57	60.33
Os01t0873100-01	Rice	plasma membrane	11.57	59.05
HORVU1Hr1G074460.2	Barley	plastid	61.38	58.33
KRH39819	Soybean	plastid	55.6	58.32
KRH24354	Soybean	nucleus, plastid	59.51	56.36
KRH60750	Soybean	extracellular, plastid	59.7	56.24
Bra011558.1-P	Field mustard	plastid	58.21	56.22
CDY41949	Canola	cytosol	50.37	56.13
CDY46205	Canola	plastid	58.4	56.09
CDY42591	Canola	cytosol	50.37	55.79
AT2G16570.1	Thale cress	plastid	58.58	55.48
Bra001980.1-P	Field mustard	plastid	57.65	55.48
KRH39820	Soybean	nucleus, plastid	59.14	55.32
PGSC0003DMT400004095	Potato	plastid	58.96	54.39
HORVU3Hr1G082280.1	Barley	plastid	62.13	54.15
Solyc01g110520.2.1	Tomato	nucleus, plastid	58.21	54.07
AT4G34740.1	Thale cress	plastid	56.53	54.01
KRH24353	Soybean	cytosol, plastid	12.69	53.97
VIT_03s0038g00880.t01	Wine grape	plastid	58.21	53.61
AT4G38880.1	Thale cress	plastid	52.99	53.38
PGSC0003DMT400089372	Potato	plastid	53.92	52.17
Solyc01g088360.2.1	Tomato	plastid	53.17	51.72
Bra011888.1-P	Field mustard	plastid	52.05	51.38
CDY61829	Canola	cytosol, plastid	57.28	50.58
CDY45330	Canola	mitochondrion	13.43	42.6
CDX75458	Canola	plastid	58.4	40.49
Bra011557.1-P	Field mustard	plastid	10.63	26.51

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1	InterPro:GATase_2_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0004044	GO:GO:0005488	GO:GO:0006139	GO:GO:0006164
GO:GO:0006189	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009113	GO:GO:0009116
GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0046872	GO:GO:0051536	EnsemblPlantsGene:GSMUA_AchrUn_randomG11710_001
EnsemblPlants:GSMUA_AchrUn_randomP11710_001	EnsemblPlants:GSMUA_AchrUn_randomT11710_001	InterPro:IPR017932	InterPro:IPR029055	UniProt:M0U8D0	HAMAP:MF_01931
InterPro:Ntn_hydrolases_N	PFAM:PF13537	PIRSF:PIRSF000485	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PFscan:PS51278
PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	InterPro:PurF	InterPro:PurF_N	SUPFAM:SSF53271	SUPFAM:SSF56235
TIGRFAMs:TIGR01134	UniParc:UPI0002969074	SEG:seg	:	:	:

Description

Amidophosphoribosyltransferase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG11710_001]

Coordinates

chrchrUn_random:+:56503280..56504890

Molecular Weight (calculated)

57289.4 Da

IEP (calculated)

7.210

GRAVY (calculated)

0.050

Length

536 amino acids

Sequence
(BLAST)

001: MAAAISSSSA AAHRLFCSPP PSVRPSGPSS PLFLSFLLKA SLKPRSSLRH RSLPPLSASY ADDVFAFDDK PREECGVFGI IGDPDAARIC YLGLHALQHR
101: GQEGAGIVSS DGTALHSRTG LGLVSKVFSR SSELEPLVGS AAIGHNRYST AGAASALANV QPFVAGYRFG QLAVAHNGNL VNYDSLRCEL ESKGSVFNTS
201: SDTEVILHLI ATSSSGPLLA RIVEALEELE GAYSLVFLTA DKLFAARDPH GFRPLVMGRR SNGAVAFASE TCALGLVGAE YVREVNPGEV IVVDSHDMSI
301: NTSCLLSKKP RKCCVFEHVY FALPNSVVFG HPVHAARYNF GAALARESPA PGADIVIPVP DSGFFAALGF AEASGLPFRQ GLIRSHYVGR SFIEPNQEER
401: NLAVKLKLAP IDGILEGKSV VVIDDSIVRG TTSSKIVQLI KNTGKAREVH MRIASPPIVG SCYYGVDTPR AEELISNRLD VEGVRQALGS DSLAFLSLES
501: LKAAFGDEAC KFCDACFTRK YPVPPREHEI FNMVDK

Best Arabidopsis Sequence Match ( AT2G16570.1 )
(BLAST)

001: MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS YFSSPSPSED NSHTPFDYHN DEDDEKPREE CGVVGIYGDP
101: EASRLCYLAL HALQHRGQEG AGIVTVSPEK VLQTITGVGL VSEVFNESKL DQLPGEFAIG HVRYSTAGAS MLKNVQPFVA GYRFGSIGVA HNGNLVNYKT
201: LRAMLEENGS IFNTSSDTEV VLHLIAISKA RPFFMRIIDA CEKLQGAYSM VFVTEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: YPGEVLVVDK DGVKSQCLMP KFEPKQCIFE HIYFSLPNSI VFGRSVYESR HVFGEILATE SPVECDVVIA VPDSGVVAAL GYAAKSGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRGVLEGK RVVVVDDSIV RGTTSSKIVR LLREAGAKEV HMRIASPPIV ASCYYGVDTP SSEELISNRL SVEEINEFIG
501: SDSLAFLSFD TLKKHLGKDS KSFCYACFTG DYPVKPTEVK VKRGGGDFID DGLVGSFENI EAGWVR

Arabidopsis Description

ASE1Amidophosphoribosyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.