Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P22240_001 | Banana | cytosol | 26.98 | 12.95 |
| TraesCS3B01G415900.1 | Wheat | plastid | 29.3 | 11.56 |
| GSMUA_Achr4P16330_001 | Banana | cytosol | 26.05 | 11.41 |
| TraesCS3D01G376600.1 | Wheat | plastid | 28.84 | 11.31 |
| TraesCS3A01G383500.1 | Wheat | plastid | 28.84 | 11.27 |
| Zm00001d038332_P001 | Maize | plastid | 28.37 | 11.23 |
| TraesCS1D01G269400.1 | Wheat | plastid | 28.37 | 11.19 |
| TraesCS1A01G269300.1 | Wheat | plastid | 28.37 | 11.15 |
| TraesCS1B01G279800.1 | Wheat | plastid | 28.37 | 11.15 |
| Zm00001d010197_P001 | Maize | plastid | 27.91 | 11.11 |
| EES18281 | Sorghum | plastid | 27.91 | 11.05 |
| Os05t0430800-01 | Rice | plastid | 27.44 | 10.91 |
| Zm00001d042673_P001 | Maize | plastid | 27.44 | 10.85 |
| HORVU1Hr1G074460.2 | Barley | plastid | 28.37 | 10.82 |
| OQU87957 | Sorghum | plastid | 27.44 | 10.79 |
| GSMUA_AchrUn_... | Banana | plastid | 26.51 | 10.63 |
| HORVU3Hr1G082280.1 | Barley | plastid | 29.3 | 10.24 |
| Bra011888.1-P | Field mustard | plastid | 25.12 | 9.94 |
| PGSC0003DMT400089372 | Potato | plastid | 24.65 | 9.57 |
| Bra011558.1-P | Field mustard | plastid | 24.65 | 9.55 |
| Solyc01g110520.2.1 | Tomato | nucleus, plastid | 25.58 | 9.53 |
| Os01t0873100-01 | Rice | plasma membrane | 4.65 | 9.52 |
| Bra001980.1-P | Field mustard | plastid | 24.65 | 9.52 |
| PGSC0003DMT400004095 | Potato | plastid | 25.58 | 9.47 |
| Solyc01g088360.2.1 | Tomato | plastid | 23.26 | 9.07 |
Protein Annotations
| Gene3D:3.30.300.20 | MapMan:35.1 | EnsemblPlantsGene:Bra011557 | EnsemblPlants:Bra011557.1 | EnsemblPlants:Bra011557.1-P | GO:GO:0006139 |
| GO:GO:0006364 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:IPR015946 | InterPro:KH_dom-like_a/b |
| UniProt:M4D500 | HAMAP:MF_00003 | PFAM:PD007327 | PFAM:PF02033 | ScanProsite:PS01319 | PANTHER:PTHR33515 |
| InterPro:RbfA | InterPro:RbfA_dom_sf | InterPro:Ribosome-bd_factorA_CS | SUPFAM:SSF89919 | TIGRFAMs:TIGR00082 | UniParc:UPI0002545514 |
Description
AT4G34730 (E=4e-100) | ribosome-binding factor A family protein
Coordinates
chrA01:+:1692374..1693457
Molecular Weight (calculated)
24048.8 Da
IEP (calculated)
7.722
GRAVY (calculated)
-0.387
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MANVFHAHQS HLFFPLNPSI STVRSKTQTF HFPQSTAPAN LRTNLSVRRR SVKCMANPRR VKMVAKQIMR ELSDMLLTDT VLQHAVLPEA ALGADRYLSS
101: LTTISDVEVS NDLQIVKVYV SVFGDDRGKD VAIAGLKSKA KYVRSELGKR MKLRLTPEVR FIEDESMERG SRVLAILDKI KAEKGSEGGA ETSDSPEDDQ
201: DWGVDDPDED IIYVK
101: LTTISDVEVS NDLQIVKVYV SVFGDDRGKD VAIAGLKSKA KYVRSELGKR MKLRLTPEVR FIEDESMERG SRVLAILDKI KAEKGSEGGA ETSDSPEDDQ
201: DWGVDDPDED IIYVK
001: MPNLLHTNQS HFFFLHHPPI YTVSSKTQAF HFPQSMAPVN LRTNLSVRRT VRCMANPRRV KMVAKQIMRE LSDMLLTDTV LQHAVLPEAA LGADRYLSSL
101: TTISDVEVSN DLQVVKVYVS VFGDDRGKDV AIAGLKSKAK YVRSELGKRM KLRLTPEVRF IEDEAMERGS RVIAILDKIK AEKGSGEGKT EPSDSTEDDQ
201: DWEVDDPDED IIYVK
101: TTISDVEVSN DLQVVKVYVS VFGDDRGKDV AIAGLKSKAK YVRSELGKRM KLRLTPEVRF IEDEAMERGS RVIAILDKIK AEKGSGEGKT EPSDSTEDDQ
201: DWEVDDPDED IIYVK
Arabidopsis Description
Probable ribosome-binding factor A, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O65693]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.