Factsheet for Zm00001d038332_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d018045_P001
Zm00001d037221_P001
Zm00001d044836_P001
Zm00001d052256_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	Zm00001d018045_P001	AT3G47620.1	21798944
AT4G34740.1	Zm00001d037221_P001	AT3G47620.1	21798944
AT4G34740.1	Zm00001d044836_P001	AT3G47620.1	21798944
AT4G34740.1	Zm00001d052256_P001	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010197_P001	Maize	plastid	92.82	93.33
EES18281	Sorghum	plastid	92.63	92.63
Os05t0430800-01	Rice	plastid	86.19	86.51
TraesCS1D01G269400.1	Wheat	plastid	86.37	86.06
TraesCS1B01G279800.1	Wheat	plastid	86.19	85.56
TraesCS1A01G269300.1	Wheat	plastid	86.0	85.37
HORVU1Hr1G074460.2	Barley	plastid	85.27	82.09
Zm00001d042673_P001	Maize	plastid	82.14	81.99
GSMUA_Achr3P22240_001	Banana	cytosol	58.56	70.98
GSMUA_Achr4P16330_001	Banana	cytosol	61.69	68.23
GSMUA_AchrUn_...	Banana	plastid	61.69	62.5
CDY41949	Canola	cytosol	52.49	59.25
Bra001980.1-P	Field mustard	plastid	60.59	59.07
KRH39819	Soybean	plastid	55.43	58.9
CDY42591	Canola	cytosol	52.3	58.68
Bra011558.1-P	Field mustard	plastid	59.12	57.84
AT4G34740.1	Thale cress	plastid	59.67	57.75
CDY46205	Canola	plastid	58.93	57.35
KRH60750	Soybean	extracellular, plastid	60.04	57.29
AT2G16570.1	Thale cress	plastid	59.48	57.07
KRH24354	Soybean	nucleus, plastid	58.56	56.18
VIT_03s0038g00880.t01	Wine grape	plastid	59.3	55.33
KRH39820	Soybean	nucleus, plastid	58.38	55.32
AT4G38880.1	Thale cress	plastid	53.96	55.08
Solyc01g110520.2.1	Tomato	nucleus, plastid	58.38	54.94
PGSC0003DMT400004095	Potato	plastid	58.75	54.91
KRH24353	Soybean	cytosol, plastid	12.52	53.97
PGSC0003DMT400089372	Potato	plastid	54.7	53.61
CDY61829	Canola	cytosol, plastid	59.85	53.54
Bra011888.1-P	Field mustard	plastid	53.41	53.41
Solyc01g088360.2.1	Tomato	plastid	54.14	53.36
CDX75458	Canola	plastid	60.41	42.43
CDY45330	Canola	mitochondrion	12.15	39.05
Bra011557.1-P	Field mustard	plastid	11.23	28.37

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	EntrezGene:103630426	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	MapMan:6.1.1.1
UniProt:A0A1D6M5J5	ProteinID:AQK86361.1	InterPro:GATase_2_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004044
GO:GO:0005488	GO:GO:0006139	GO:GO:0006164	GO:GO:0006189	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009113	GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757
GO:GO:0046872	GO:GO:0051536	InterPro:IPR017932	InterPro:IPR029055	HAMAP:MF_01931	InterPro:Ntn_hydrolases_N
PFAM:PF13537	PIRSF:PIRSF000485	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PFscan:PS51278	PANTHER:PTHR11907
PANTHER:PTHR11907:SF14	InterPro:PurF	InterPro:PurF_N	SUPFAM:SSF53271	SUPFAM:SSF56235	TIGRFAMs:TIGR01134
UniParc:UPI00022151FA	EnsemblPlantsGene:Zm00001d038332	EnsemblPlants:Zm00001d038332_P001	EnsemblPlants:Zm00001d038332_T001	SEG:seg	:

Description

Amidophosphoribosyltransferase

Coordinates

chr6:+:154779604..154781235

Molecular Weight (calculated)

58385.6 Da

IEP (calculated)

7.383

GRAVY (calculated)

-0.017

Length

543 amino acids

Sequence
(BLAST)

001: MGIVAAAAAT TATSRLLYRY AAAGSDRHNR HHLRYYASPY PLSLRCGSGR REAAARALLP DRVTPFSYGV DEDADDHPRE ECGVIGVVGD PDASSLCYLG
101: LQKLQHRGEE GAGIVAVGGD GKLKSVTGLG LVADVFADPS RLASLPGPAA IGHVRYSTAG AAASLRNVQP FLAGYRFGQV AVAHNGNLVN YQALRNKLEA
201: RGSIFNTSSD TEVILHLIAT SLSRPLLARV CDACERLAGA YSLLFLTADK LFAVRDPHGF RPLVMGRRRN GAVVFASETC ALDLIDATYE REVEPGEVVV
301: VDRRDMSVAS ACLVPHRPRR ACVFEHIYFS LPNSVVFSHA VHERRTAFGQ ALAEESPAPG ADVVIPVPDS GFYAALGFAR ASGLEFQQGL IRWHYSGRSF
401: IQPTQAIRDL AVKLKLAPVR GVITGKSVVV VDDSLVRGTT SSKIVRLLRD AGAREVHMRI ASPPVVGSCL YGIDTPSEGE LISNRMDLDG VRREIGSDSL
501: AFLSLDKLHS IYGEESGNYC DACFSRKYPV LPTLADPAAE LED

Best Arabidopsis Sequence Match ( AT2G16570.1 )
(BLAST)

001: MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS YFSSPSPSED NSHTPFDYHN DEDDEKPREE CGVVGIYGDP
101: EASRLCYLAL HALQHRGQEG AGIVTVSPEK VLQTITGVGL VSEVFNESKL DQLPGEFAIG HVRYSTAGAS MLKNVQPFVA GYRFGSIGVA HNGNLVNYKT
201: LRAMLEENGS IFNTSSDTEV VLHLIAISKA RPFFMRIIDA CEKLQGAYSM VFVTEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: YPGEVLVVDK DGVKSQCLMP KFEPKQCIFE HIYFSLPNSI VFGRSVYESR HVFGEILATE SPVECDVVIA VPDSGVVAAL GYAAKSGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRGVLEGK RVVVVDDSIV RGTTSSKIVR LLREAGAKEV HMRIASPPIV ASCYYGVDTP SSEELISNRL SVEEINEFIG
501: SDSLAFLSFD TLKKHLGKDS KSFCYACFTG DYPVKPTEVK VKRGGGDFID DGLVGSFENI EAGWVR

Arabidopsis Description

ASE1Amidophosphoribosyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.