Factsheet for Os05t0430800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0747400-01
Os06t0226700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34740.1	Os02t0747400-01	AT3G47620.1	21798944
AT4G34740.1	Os06t0226700-01	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G269400.1	Wheat	plastid	88.35	87.71
EES18281	Sorghum	plastid	87.8	87.48
Zm00001d010197_P001	Maize	plastid	86.88	87.04
TraesCS1B01G279800.1	Wheat	plastid	87.99	87.02
TraesCS1A01G269300.1	Wheat	plastid	87.43	86.47
Zm00001d038332_P001	Maize	plastid	86.51	86.19
Os01t0873100-01	Rice	plasma membrane	16.27	83.81
HORVU1Hr1G074460.2	Barley	plastid	86.88	83.33
GSMUA_Achr3P22240_001	Banana	cytosol	57.86	69.87
GSMUA_Achr4P16330_001	Banana	cytosol	62.29	68.64
GSMUA_AchrUn_...	Banana	plastid	61.37	61.94
CDY41949	Canola	cytosol	51.39	57.8
KRH39819	Soybean	plastid	54.53	57.73
Bra011558.1-P	Field mustard	plastid	58.96	57.48
Bra001980.1-P	Field mustard	plastid	58.96	57.27
CDY42591	Canola	cytosol	50.83	56.82
KRH60750	Soybean	extracellular, plastid	59.52	56.59
CDY46205	Canola	plastid	57.49	55.73
AT4G34740.1	Thale cress	plastid	57.67	55.62
KRH39820	Soybean	nucleus, plastid	58.6	55.32
AT2G16570.1	Thale cress	plastid	57.86	55.3
KRH24354	Soybean	nucleus, plastid	57.67	55.12
PGSC0003DMT400004095	Potato	plastid	58.78	54.73
Solyc01g110520.2.1	Tomato	nucleus, plastid	58.23	54.59
VIT_03s0038g00880.t01	Wine grape	plastid	58.6	54.47
KRH24353	Soybean	cytosol, plastid	12.57	53.97
AT4G38880.1	Thale cress	plastid	52.87	53.76
PGSC0003DMT400089372	Potato	plastid	53.79	52.53
Bra011888.1-P	Field mustard	plastid	52.68	52.49
Solyc01g088360.2.1	Tomato	plastid	53.42	52.45
CDY61829	Canola	cytosol, plastid	57.67	51.4
CDX75458	Canola	plastid	58.96	41.27
CDY45330	Canola	mitochondrion	12.75	40.83
Bra011557.1-P	Field mustard	plastid	10.91	27.44

Protein Annotations

KEGG:00230+2.4.2.14	KEGG:00250+2.4.2.14	Gene3D:3.40.50.2020	Gene3D:3.60.20.10	EntrezGene:4338879	MapMan:6.1.1.1
ProteinID:AAT58743.1	ProteinID:AAV59428.1	EMBL:AK101162	ProteinID:BAF17540.1	ProteinID:BAS94160.1	MEROPS:C44.001
InterPro:GATase_2_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004044	GO:GO:0005488	GO:GO:0006139
GO:GO:0006164	GO:GO:0006189	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009113
GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0046872	GO:GO:0051536
InterPro:IPR017932	InterPro:IPR029055	HAMAP:MF_01931	InterPro:Ntn_hydrolases_N	EnsemblPlantsGene:Os05g0430800	EnsemblPlants:Os05t0430800-01
PFAM:PF00156	PFAM:PF13537	PIRSF:PIRSF000485	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PFscan:PS51278
PANTHER:PTHR11907	PANTHER:PTHR11907:SF14	InterPro:PurF	InterPro:PurF_N	UniProt:Q6I5V5	SUPFAM:SSF53271
SUPFAM:SSF56235	TIGRFAMs:TIGR01134	UniParc:UPI00003B0E9B	RefSeq:XP_015640464.1	SEG:seg	:

Description

Similar to Amidophosphoribosyltransferase, chloroplast precursor (EC 2.4.2.14) (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPAT). (Os05t0430800-01)

Coordinates

chr5:+:21141378..21143453

Molecular Weight (calculated)

58157.5 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.015

Length

541 amino acids

Sequence
(BLAST)

001: MAAAAAAAST SRLLLLRHHH HAAADGSKQQ QQLRYSSKPS SLALPRLRLL PAAGALLPDR VTPFSYEEDD ESDDHPREEC GLVGVVGDPD ASSLCYLGLQ
101: KLQHRGEEGA GIVAVGGDGK LKSVTGLGLV ADVFGDPARL ASLPGPAAIG HVRYSTAGAA ASLRNVQPFL AGYRFGQVAV AHNGNLVNYQ ALRNKLEARG
201: SIFNTSSDTE VILHLIATSL SRPLLSRICD ACERLAGAYS LLFLTADKMF AVRDPHGFRP LVLGRRRNGT VAFASETCAL DLIEATYERE VEPGEVVVVD
301: RRDMSVSSAC LVPHRPRRSC VFEHIYFALP NSVVFSHAVH ERRTAFGRAL AEESPAAGAD VVIPVPDSGF YAALGFARAS GLEFQQGLIR WHYSGRSFIQ
401: PTQAIRDLAV KLKLAPVHGV IRGKSVVVVD DSLVRGTTSS KIVRLLRDAG AREVHMRIAS PPVVGSCLYG IDTPSEGELI SNRMDLEGVR REIGSDSLAF
501: LSLGKLHSIY GAEAEGYCDA CFSRNYPVLP TLPEPVVELE E

Best Arabidopsis Sequence Match ( AT2G16570.1 )
(BLAST)

001: MAATTSFSSS LSLITKPNNS SYTNQPLPLF PKPFLKPPHL SLLPSPLSSP PPSLIHGVSS YFSSPSPSED NSHTPFDYHN DEDDEKPREE CGVVGIYGDP
101: EASRLCYLAL HALQHRGQEG AGIVTVSPEK VLQTITGVGL VSEVFNESKL DQLPGEFAIG HVRYSTAGAS MLKNVQPFVA GYRFGSIGVA HNGNLVNYKT
201: LRAMLEENGS IFNTSSDTEV VLHLIAISKA RPFFMRIIDA CEKLQGAYSM VFVTEDKLVA VRDPYGFRPL VMGRRSNGAV VFASETCALD LIEATYEREV
301: YPGEVLVVDK DGVKSQCLMP KFEPKQCIFE HIYFSLPNSI VFGRSVYESR HVFGEILATE SPVECDVVIA VPDSGVVAAL GYAAKSGVPF QQGLIRSHYV
401: GRTFIEPSQK IRDFGVKLKL SPVRGVLEGK RVVVVDDSIV RGTTSSKIVR LLREAGAKEV HMRIASPPIV ASCYYGVDTP SSEELISNRL SVEEINEFIG
501: SDSLAFLSFD TLKKHLGKDS KSFCYACFTG DYPVKPTEVK VKRGGGDFID DGLVGSFENI EAGWVR

Arabidopsis Description

ASE1Amidophosphoribosyltransferase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SI61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.