Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36901 | Canola | cytosol | 79.27 | 91.62 |
| Bra033769.1-P | Field mustard | nucleus | 90.67 | 90.83 |
| Bra018081.1-P | Field mustard | cytosol | 90.5 | 90.5 |
| CDY44976 | Canola | cytosol | 78.76 | 90.3 |
| CDY58070 | Canola | cytosol | 77.03 | 90.1 |
| CDY70805 | Canola | nucleus | 45.25 | 87.04 |
| VIT_07s0130g00490.t01 | Wine grape | cytosol | 79.1 | 79.38 |
| CDY58069 | Canola | nucleus | 60.79 | 78.92 |
| VIT_07s0031g02330.t01 | Wine grape | cytosol | 78.07 | 78.34 |
| PGSC0003DMT400063189 | Potato | cytosol | 73.4 | 78.12 |
| Solyc03g113740.2.1 | Tomato | cytosol, mitochondrion | 77.2 | 77.6 |
| KRH27971 | Soybean | nucleus | 74.61 | 74.87 |
| KRH77487 | Soybean | nucleus | 73.58 | 73.7 |
| KRH24006 | Soybean | cytosol | 73.23 | 71.99 |
| GSMUA_Achr11P... | Banana | cytosol | 68.05 | 65.23 |
| EES07517 | Sorghum | cytosol | 66.15 | 63.83 |
| TraesCS6B01G273900.1 | Wheat | cytosol | 65.98 | 63.77 |
| TraesCS6A01G251400.1 | Wheat | cytosol | 65.98 | 63.77 |
| TraesCS6D01G233200.1 | Wheat | cytosol | 65.8 | 63.61 |
| Zm00001d017475_P002 | Maize | cytosol | 65.63 | 63.44 |
| Os02t0656300-01 | Rice | cytosol | 64.94 | 62.98 |
| HORVU6Hr1G062870.1 | Barley | cytosol, plastid | 65.98 | 58.86 |
| HORVU0Hr1G027080.4 | Barley | plastid | 60.79 | 58.67 |
| KRH29310 | Soybean | cytosol | 30.57 | 55.31 |
| Os06t0679100-00 | Rice | plastid | 16.06 | 52.25 |
| AT2G20000.1 | Thale cress | cytosol | 19.52 | 15.19 |
| AT3G16320.1 | Thale cress | cytosol | 18.65 | 14.84 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.4.1.1.2.4 | EntrezGene:823970 | ProteinID:AEE78373.1 | EMBL:AK220695 | ProteinID:ANM64940.1 |
| InterPro:APC8 | Symbol:APC8 | ArrayExpress:AT3G48150 | EnsemblPlantsGene:AT3G48150 | RefSeq:AT3G48150 | TAIR:AT3G48150 |
| RefSeq:AT3G48150-TAIR-G | EnsemblPlants:AT3G48150.1 | TAIR:AT3G48150.1 | EMBL:AY056217 | EMBL:AY057562 | EMBL:AY099779 |
| Unigene:At.26312 | EMBL:BT000289 | ProteinID:CAB51062.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 |
| GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0030071 | GO:GO:0031347 | GO:GO:0051301 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | RefSeq:NP_001326941.1 | RefSeq:NP_190398.1 | PFAM:PF04049 |
| PFAM:PF13176 | PFAM:PF13181 | PFAM:PF13414 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR12558 | PANTHER:PTHR12558:SF10 | UniProt:Q9STS3 | SMART:SM00028 | SUPFAM:SSF48452 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI00000AC241 | SEG:seg | : |
Description
APC8Anaphase-promoting complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STS3]
Coordinates
chr3:-:17779507..17782682
Molecular Weight (calculated)
67138.1 Da
IEP (calculated)
6.588
GRAVY (calculated)
-0.433
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKECCRNE IRAAIRQLSD RCLYSAAKWA GEQLVGIEQD PSNFTPANTR FQRGSSSIRR RFSTNESIST PLPSVGFSQA ATPLPEEDEA IDGDIYLLAK
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.