Factsheet for Os04t0589200-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0696000-02
Os02t0687500-01
Os04t0386300-01
Os04t0406600-01
Os04t0654700-02
Os09t0133600-01
Os09t0565700-01
Os09t0566050-00
Os10t0565500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G17668.1	Os01t0696000-02	AT1G06510.1	21798944
AT3G17668.1	Os04t0654700-02	AT1G22920.1	21798944
AT3G17668.1	Os04t0406600-01	AT3G44720.1	21798944
AT3G17668.1	Os09t0565700-01	AT3G44720.1	21798944
AT3G17668.1	Os09t0566050-00	AT3G44720.1	21798944
AT3G17668.1	Os04t0386300-01	AT3G48550.1	21798944
AT3G17668.1	Os02t0687500-01	AT4G17680.1	21798944
AT3G17668.1	Os10t0565500-01	AT4G17680.1	21798944
AT3G17668.1	Os09t0133600-01	AT4G22240.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12747	Sorghum	plastid	76.52	77.69
TraesCS2B01G472600.1	Wheat	plastid	71.97	73.08
TraesCS2D01G450800.1	Wheat	plastid	70.45	71.54
TraesCS2A01G451100.1	Wheat	plastid	69.7	70.77
Zm00001d002501_P001	Maize	cytosol	38.64	65.38
HORVU2Hr1G105520.1	Barley	cytosol, plastid	61.36	57.86
GSMUA_Achr2P18190_001	Banana	plastid	53.79	48.3
Solyc06g051160.2.1	Tomato	plastid	49.24	48.15
PGSC0003DMT400040427	Potato	plastid	48.48	47.41
VIT_15s0021g00250.t01	Wine grape	cytosol	37.12	45.79
KRH73492	Soybean	plastid	46.21	43.88
CDY46888	Canola	mitochondrion	41.67	40.44
AT3G17668.1	Thale cress	plastid	39.39	38.52

Protein Annotations

EMBL:AK068571	EnsemblPlants:Os04t0589200-01	EnsemblPlantsGene:Os04g0589200	EntrezGene:4336811	InterPro:HSP_DnaJ_Cys-rich_dom_sf	PANTHER:PTHR15852
PANTHER:PTHR15852:SF30	ProteinID:BAF15611.1	ProteinID:BAS90727.1	ProteinID:CAE04859.2	ProteinID:EEE61578.1	RefSeq:XP_015634278.1
SUPFAM:SSF57938	UniParc:UPI000021C8A5	UniProt:Q7XM02	MapMan:35.2	:	:

Description

Heat shock protein DnaJ, cysteine-rich region domain containing protein. (Os04t0589200-01);Similar to predicted protein. (Os04t0589200-02)

Coordinates

chr4:+:29787828..29789615

Molecular Weight (calculated)

14436.3 Da

IEP (calculated)

9.301

GRAVY (calculated)

-0.588

Length

132 amino acids

Sequence
(BLAST)

001: MASTPAAGPN GVASPAGQAP SSSLPGFHEA PPSVLISRPS WIVRSESNIR RERPKRPDPP CTICRGTGKI DCRNCFGRGR TNHADLVMLP KGEWPQWCRI
101: CGGSGLDYCH RCHGTGEFRE PMGFHFATIH RK

Best Arabidopsis Sequence Match ( AT3G17668.1 )
(BLAST)

001: MAVNACLSPP EMMAVRPGEG VPNSKSTQGK TRLYLTKPSW IVRTQSGAKT CMKSKAKGRC VICHGSGRVD CFNCCGKGRT NCVDVEMLPR GEWPKWCKSC
101: GGSGLSDCSR CLGTGEYRYI MGFRFLNQND DADPQ

Arabidopsis Description

ENAENA [Source:UniProtKB/TrEMBL;Acc:A0A178VIM6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.