Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g051160.2.1 | Tomato | plastid | 61.15 | 62.96 |
| PGSC0003DMT400040427 | Potato | plastid | 59.71 | 61.48 |
| VIT_15s0021g00250.t01 | Wine grape | cytosol | 46.04 | 59.81 |
| AT3G17668.1 | Thale cress | plastid | 50.36 | 51.85 |
| CDY46888 | Canola | mitochondrion | 50.36 | 51.47 |
| EES12747 | Sorghum | plastid | 46.76 | 50.0 |
| Zm00001d002501_P001 | Maize | cytosol | 28.06 | 50.0 |
| GSMUA_Achr2P18190_001 | Banana | plastid | 50.36 | 47.62 |
| Os04t0589200-01 | Rice | plastid | 43.88 | 46.21 |
| TraesCS2A01G451100.1 | Wheat | plastid | 42.45 | 45.38 |
| TraesCS2B01G472600.1 | Wheat | plastid | 42.45 | 45.38 |
| TraesCS2D01G450800.1 | Wheat | plastid | 42.45 | 45.38 |
| HORVU2Hr1G105520.1 | Barley | cytosol, plastid | 42.45 | 42.14 |
Protein Annotations
| EMBL:ACUP02001279 | EnsemblPlants:KRH73492 | EnsemblPlantsGene:GLYMA_02G276300 | EntrezGene:102665510 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0031072 | GO:GO:0051082 | InterPro:HSP_DnaJ_Cys-rich_dom_sf | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF30 |
| ProteinID:KRH73492 | ProteinID:KRH73492.1 | SUPFAM:SSF57938 | UniParc:UPI00023BC7FD | UniProt:K7KB52 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr2:+:45937471..45938812
Molecular Weight (calculated)
15713.7 Da
IEP (calculated)
9.935
GRAVY (calculated)
-0.749
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFGTLSLSV VVRFEATNFN GLPPSRSSNS LPHLSFTKPS WVVRTESNVR KKRRKKPDPH CVVCEGSGRV DCHQCHGKGR TNQVHLEMLP KGEWPKWCRT
101: CGGSGLSYCS RCLGTGEYRY IMGFQFMNRD NNQSQENKS
101: CGGSGLSYCS RCLGTGEYRY IMGFQFMNRD NNQSQENKS
001: MAVNACLSPP EMMAVRPGEG VPNSKSTQGK TRLYLTKPSW IVRTQSGAKT CMKSKAKGRC VICHGSGRVD CFNCCGKGRT NCVDVEMLPR GEWPKWCKSC
101: GGSGLSDCSR CLGTGEYRYI MGFRFLNQND DADPQ
101: GGSGLSDCSR CLGTGEYRYI MGFRFLNQND DADPQ
Arabidopsis Description
ENAENA [Source:UniProtKB/TrEMBL;Acc:A0A178VIM6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.