Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G17668.1 | Thale cress | plastid | 72.79 | 73.33 |
| KRH73492 | Soybean | plastid | 51.47 | 50.36 |
| VIT_15s0021g00250.t01 | Wine grape | cytosol | 37.5 | 47.66 |
| Zm00001d002501_P001 | Maize | cytosol | 26.47 | 46.15 |
| PGSC0003DMT400040427 | Potato | plastid | 44.85 | 45.19 |
| Solyc06g051160.2.1 | Tomato | plastid | 44.85 | 45.19 |
| EES12747 | Sorghum | plastid | 42.65 | 44.62 |
| Os04t0589200-01 | Rice | plastid | 40.44 | 41.67 |
| GSMUA_Achr2P18190_001 | Banana | plastid | 41.91 | 38.78 |
| TraesCS2B01G472600.1 | Wheat | plastid | 36.76 | 38.46 |
| TraesCS2D01G450800.1 | Wheat | plastid | 36.76 | 38.46 |
| TraesCS2A01G451100.1 | Wheat | plastid | 36.03 | 37.69 |
| HORVU2Hr1G105520.1 | Barley | cytosol, plastid | 36.76 | 35.71 |
Protein Annotations
| EnsemblPlants:CDY46888 | EnsemblPlantsGene:GSBRNA2T00086353001 | GO:A0A078ICB5 | InterPro:HSP_DnaJ_Cys-rich_dom_sf | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF30 |
| ProteinID:CDY46888 | ProteinID:CDY46888.1 | SUPFAM:SSF57938 | UniParc:UPI0004EED707 | UniProt:A0A078ICB5 | MapMan:35.2 |
Description
BnaA01g27880DBnaA01g27880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICB5]
Coordinates
chrLK032689:-:41602..42432
Molecular Weight (calculated)
15215.4 Da
IEP (calculated)
9.096
GRAVY (calculated)
-0.637
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASARLRLP AAMAVRREEG APNSKSSQEK PRIYLNKPSW IVTTQCGAKT ETRRKEKGRC VICHGTGRVD CFNCSGKGRT NCVDMEMLPK GEWPKWCRSC
101: GGSGLCECSR CLGTGEYRYI MGFRFLNKHD DVDSQL
101: GGSGLCECSR CLGTGEYRYI MGFRFLNKHD DVDSQL
001: MAVNACLSPP EMMAVRPGEG VPNSKSTQGK TRLYLTKPSW IVRTQSGAKT CMKSKAKGRC VICHGSGRVD CFNCCGKGRT NCVDVEMLPR GEWPKWCKSC
101: GGSGLSDCSR CLGTGEYRYI MGFRFLNQND DADPQ
101: GGSGLSDCSR CLGTGEYRYI MGFRFLNQND DADPQ
Arabidopsis Description
ENAENA [Source:UniProtKB/TrEMBL;Acc:A0A178VIM6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.