Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2A01G451100.1 | Wheat | plastid | 75.0 | 80.77 |
TraesCS2B01G472600.1 | Wheat | plastid | 74.29 | 80.0 |
TraesCS2D01G450800.1 | Wheat | plastid | 72.14 | 77.69 |
EES12747 | Sorghum | plastid | 60.71 | 65.38 |
Zm00001d002501_P001 | Maize | cytosol | 35.71 | 64.1 |
Os04t0589200-01 | Rice | plastid | 57.86 | 61.36 |
PGSC0003DMT400040427 | Potato | plastid | 47.14 | 48.89 |
Solyc06g051160.2.1 | Tomato | plastid | 45.71 | 47.41 |
GSMUA_Achr2P18190_001 | Banana | plastid | 47.14 | 44.9 |
VIT_15s0021g00250.t01 | Wine grape | cytosol | 34.29 | 44.86 |
KRH73492 | Soybean | plastid | 42.14 | 42.45 |
CDY46888 | Canola | mitochondrion | 35.71 | 36.76 |
AT3G17668.1 | Thale cress | plastid | 35.0 | 36.3 |
Protein Annotations
EnsemblPlants:HORVU2Hr1G105520.1 | EnsemblPlantsGene:HORVU2Hr1G105520 | InterPro:HSP_DnaJ_Cys-rich_dom_sf | PANTHER:PTHR15852 | PANTHER:PTHR15852:SF30 | SEG:seg |
SUPFAM:SSF57938 | UniParc:UPI000B479A59 | UniProt:A0A287JBG7 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr2H:+:706965478..706967408
Molecular Weight (calculated)
12164.6 Da
IEP (calculated)
9.934
GRAVY (calculated)
-0.617
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPGFEGPP SRLGVRRPAW VVRTESNVRR ERRKRPDPPC TICKGTGTIN CRNCFGRGRV NHVDLAVLPK
101: GEWPQWCQIC GGSGLDYCHR CHGTGEYREP MGFHFTVNRK
101: GEWPQWCQIC GGSGLDYCHR CHGTGEYREP MGFHFTVNRK
001: MAVNACLSPP EMMAVRPGEG VPNSKSTQGK TRLYLTKPSW IVRTQSGAKT CMKSKAKGRC VICHGSGRVD CFNCCGKGRT NCVDVEMLPR GEWPKWCKSC
101: GGSGLSDCSR CLGTGEYRYI MGFRFLNQND DADPQ
101: GGSGLSDCSR CLGTGEYRYI MGFRFLNQND DADPQ
Arabidopsis Description
ENAENA [Source:UniProtKB/TrEMBL;Acc:A0A178VIM6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.