CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 7
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EER96348
EES05120
EES05709
EES10725
EES12026
EES12270
KXG27287
KXG33191
KXG38894

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G17668.1	KXG33191	AT1G06510.1	21798944
AT3G17668.1	KXG27287	AT1G22920.1	21798944
AT3G17668.1	EER96348	AT3G44720.1	21798944
AT3G17668.1	EES10725	AT3G44720.1	21798944
AT3G17668.1	EES05120	AT3G48550.1	21798944
AT3G17668.1	EES12026	AT3G48550.1	21798944
AT3G17668.1	EES05709	AT4G17680.1	21798944
AT3G17668.1	KXG38894	AT4G17680.1	21798944
AT3G17668.1	EES12270	AT4G22240.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G472600.1	Wheat	plastid	79.23	79.23
TraesCS2D01G450800.1	Wheat	plastid	76.92	76.92
Os04t0589200-01	Rice	plastid	77.69	76.52
TraesCS2A01G451100.1	Wheat	plastid	76.15	76.15
Zm00001d002501_P001	Maize	cytosol	40.0	66.67
HORVU2Hr1G105520.1	Barley	cytosol, plastid	65.38	60.71
PGSC0003DMT400040427	Potato	plastid	55.38	53.33
Solyc06g051160.2.1	Tomato	plastid	55.38	53.33
GSMUA_Achr2P18190_001	Banana	plastid	57.69	51.02
VIT_15s0021g00250.t01	Wine grape	cytosol	40.0	48.6
KRH73492	Soybean	plastid	50.0	46.76
CDY46888	Canola	mitochondrion	44.62	42.65
AT3G17668.1	Thale cress	plastid	43.85	42.22

Protein Annotations

EnsemblPlants:EES12747	EnsemblPlantsGene:SORBI_3006G196000	EntrezGene:8060460	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0031072	GO:GO:0051082	InterPro:HSP_DnaJ_Cys-rich_dom_sf	PANTHER:PTHR15852	PANTHER:PTHR15852:SF30	ProteinID:EES12747
ProteinID:EES12747.1	RefSeq:XP_002448419.1	SUPFAM:SSF57938	UniParc:UPI0001A873C5	UniProt:C5YEY6	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:-:54896675..54900072

Molecular Weight (calculated)

14145.0 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.595

Length

130 amino acids

Sequence
(BLAST)

001: MAAAPGTGPG CLGSPAQAPS SSLAGVEGAP RQLGVSKPSW IVRTESNVRR ERPKRPDPPC TICRGTGRID CRNCFGRGRT NRADLVMLPK GEWPQWCRIC
101: GGSGLDYCLR CHGTGEYREP MGFHFTVQRK

Best Arabidopsis Sequence Match ( AT3G17668.1 )
(BLAST)

001: MAVNACLSPP EMMAVRPGEG VPNSKSTQGK TRLYLTKPSW IVRTQSGAKT CMKSKAKGRC VICHGSGRVD CFNCCGKGRT NCVDVEMLPR GEWPKWCKSC
101: GGSGLSDCSR CLGTGEYRYI MGFRFLNQND DADPQ

Arabidopsis Description

ENAENA [Source:UniProtKB/TrEMBL;Acc:A0A178VIM6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.