Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 5
- endoplasmic reticulum 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0687500-01 | |
| Os10t0565500-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17880.1 | Os02t0687500-01 | AT4G17680.1 | 21798944 |
| AT2G17880.1 | Os10t0565500-01 | AT4G17680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G271900.1 | Wheat | plastid | 50.0 | 51.77 |
| TraesCS7A01G271600.1 | Wheat | plastid | 49.32 | 51.06 |
| TraesCS7B01G170400.1 | Wheat | plastid | 48.63 | 50.35 |
| Zm00001d053213_P001 | Maize | mitochondrion, plastid | 47.95 | 50.0 |
| HORVU7Hr1G057330.1 | Barley | plastid | 47.95 | 49.65 |
| KXG25435 | Sorghum | plastid | 50.0 | 48.99 |
| Zm00001d032030_P001 | Maize | plastid | 44.52 | 47.1 |
| KRH69778 | Soybean | mitochondrion | 32.88 | 47.06 |
| Os06t0716100-01 | Rice | plastid | 41.1 | 45.11 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 43.84 | 43.84 |
| Os03t0244950-00 | Rice | mitochondrion, nucleus, plastid | 40.41 | 34.5 |
| KRH28802 | Soybean | plastid | 36.3 | 33.54 |
| KRH76655 | Soybean | plastid | 35.62 | 32.91 |
| KRH08066 | Soybean | plastid | 34.93 | 32.48 |
| VIT_03s0038g02110.t01 | Wine grape | cytosol, nucleus, plastid | 33.56 | 32.45 |
| CDY30342 | Canola | plastid | 32.88 | 31.17 |
| KRH38394 | Soybean | plastid | 28.77 | 30.22 |
| PGSC0003DMT400061357 | Potato | plastid | 31.51 | 30.07 |
| Bra037247.1-P | Field mustard | plastid | 31.51 | 29.87 |
| Solyc02g062160.1.1 | Tomato | plastid | 31.51 | 29.87 |
| CDY26834 | Canola | plastid | 31.51 | 29.11 |
| CDY29205 | Canola | plastid | 31.51 | 28.93 |
| Bra040872.1-P | Field mustard | plastid | 31.51 | 28.93 |
| CDX75547 | Canola | plastid | 31.51 | 28.75 |
| AT4G36040.1 | Thale cress | plastid | 31.51 | 28.57 |
| Bra017744.1-P | Field mustard | plastid | 31.51 | 28.57 |
| AT2G17880.1 | Thale cress | plastid | 30.82 | 28.12 |
| PGSC0003DMT400009189 | Potato | plastid | 27.4 | 27.97 |
| CDY07811 | Canola | plastid | 30.82 | 27.78 |
| CDX69193 | Canola | plastid | 30.82 | 27.78 |
| Bra011656.1-P | Field mustard | plastid | 30.14 | 27.67 |
| KRH50148 | Soybean | plastid | 26.71 | 27.66 |
| CDX72573 | Canola | plastid | 30.14 | 27.33 |
| KRH08065 | Soybean | plastid | 30.82 | 27.27 |
| KRG99625 | Soybean | plastid | 23.97 | 26.52 |
| CDY24828 | Canola | plastid | 28.77 | 26.09 |
| Bra010502.1-P | Field mustard | plastid | 28.77 | 26.09 |
| CDY34072 | Canola | plastid | 28.77 | 26.09 |
| VIT_04s0023g03470.t01 | Wine grape | cytosol, plastid | 35.62 | 25.87 |
| KRH20682 | Soybean | plastid | 23.29 | 24.64 |
| KRH69779 | Soybean | mitochondrion | 26.03 | 18.63 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | EntrezGene:4346241 | ProteinID:BAD09951.1 | ProteinID:BAD10757.1 | ProteinID:BAF24349.2 |
| ProteinID:BAT06565.1 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | ProteinID:EEE69112.1 | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | EnsemblPlantsGene:Os08g0548400 | EnsemblPlants:Os08t0548400-00 | PFAM:PF00226 | PRINTS:PR00625 | ScanProsite:PS00636 |
| PFscan:PS50076 | PANTHER:PTHR44240 | PANTHER:PTHR44240:SF2 | UniProt:Q6YT03 | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI000023AF8F | RefSeq:XP_015649012.1 | SEG:seg | : | : | : |
Description
DnaJ domain protein C66, rice DJC23 homologSimilar to chaperone protein dnaJ 11. (Os08t0548400-00)
Coordinates
chr8:+:27507734..27508477
Molecular Weight (calculated)
15733.7 Da
IEP (calculated)
10.827
GRAVY (calculated)
-0.299
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MISAPSVGIA FAPKPPPAAA VGSYRARKVR CAVAVAPAPA PAGTLYDVLG LRAGATVREI KAAYRRLARE RHPDVAASAG ADDFVRLHDA YATLSDPDSR
101: ARYDRDVVAV ASMARGAHHR TMAAPAAAPR WYGRRPRRTW ETDQCW
101: ARYDRDVVAV ASMARGAHHR TMAAPAAAPR WYGRRPRRTW ETDQCW
001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
Arabidopsis Description
At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.