Factsheet for HORVU7Hr1G057330.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
endoplasmic reticulum 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G054930.3
HORVU6Hr1G066640.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17880.1	HORVU1Hr1G054930.3	AT4G17680.1	21798944
AT2G17880.1	HORVU6Hr1G066640.4	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G271600.1	Wheat	plastid	81.56	81.56
TraesCS7D01G271900.1	Wheat	plastid	80.85	80.85
TraesCS7B01G170400.1	Wheat	plastid	80.14	80.14
HORVU7Hr1G116960.1	Barley	plastid	48.94	50.74
Zm00001d053213_P001	Maize	mitochondrion, plastid	49.65	50.0
Zm00001d032030_P001	Maize	plastid	47.52	48.55
KXG25435	Sorghum	plastid	51.06	48.32
Os08t0548400-00	Rice	plastid	49.65	47.95
HORVU7Hr1G116890.2	Barley	plastid	47.52	47.86
KRH69778	Soybean	mitochondrion	34.04	47.06
HORVU7Hr1G045280.1	Barley	plastid	31.21	39.64
CDY30342	Canola	plastid	39.72	36.36
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	37.59	36.3
KRH08066	Soybean	plastid	39.72	35.67
Bra037247.1-P	Field mustard	plastid	37.59	34.42
AT2G17880.1	Thale cress	plastid	39.01	34.38
KRH76655	Soybean	plastid	37.59	33.54
CDY26834	Canola	plastid	37.59	33.54
Solyc02g062160.1.1	Tomato	plastid	36.17	33.12
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	35.46	33.11
CDX75547	Canola	plastid	36.88	32.5
HORVU4Hr1G063590.1	Barley	plastid	39.72	32.37
Bra017744.1-P	Field mustard	plastid	36.88	32.3
KRH28802	Soybean	plastid	36.17	32.28
CDX69193	Canola	plastid	36.88	32.1
Bra040872.1-P	Field mustard	plastid	36.17	32.08
Bra011656.1-P	Field mustard	plastid	36.17	32.08
CDY34072	Canola	plastid	36.17	31.68
CDY07811	Canola	plastid	36.17	31.48
PGSC0003DMT400061357	Potato	plastid	34.04	31.37
AT4G36040.1	Thale cress	plastid	35.46	31.06
CDY24828	Canola	plastid	35.46	31.06
Bra010502.1-P	Field mustard	plastid	35.46	31.06
CDY29205	Canola	plastid	34.75	30.82
KRH08065	Soybean	plastid	35.46	30.3
CDX72573	Canola	plastid	34.04	29.81
PGSC0003DMT400009189	Potato	plastid	29.08	28.67
KRH38394	Soybean	plastid	26.95	27.34
KRH50148	Soybean	plastid	26.95	26.95
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	38.3	26.87
KRH20682	Soybean	plastid	24.11	24.64
KRG99625	Soybean	plastid	21.99	23.48
KRH69779	Soybean	mitochondrion	31.21	21.57

Protein Annotations

EMBL:AK364979	EnsemblPlants:HORVU7Hr1G057330.1	EnsemblPlantsGene:HORVU7Hr1G057330	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44240	PANTHER:PTHR44240:SF2	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI0002006D57	UniProt:F2DM61	MapMan:35.2	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DM61]

Coordinates

chrchr7H:+:248580108..248581914

Molecular Weight (calculated)

15187.9 Da

IEP (calculated)

9.931

GRAVY (calculated)

-0.326

Length

141 amino acids

Sequence
(BLAST)

001: MISAPPVMQS SVARPALAGF RQAASCSSSR RTVRCAVAVA SAAPAGRCTL YEVLGLRAGA TGGEIKAAYR RLARERHPDV AGAAGDDFIR LHDAYATLSD
101: PDARARYDRD VVVQAYAQPP AARTNGVWGR PRRTWETDQC W

Best Arabidopsis Sequence Match ( AT2G17880.1 )
(BLAST)

001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW

Arabidopsis Description

At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.