Factsheet for TraesCS7B01G170400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215300.1
TraesCS1B01G228800.1
TraesCS1D01G217800.1
TraesCS6A01G262200.1
TraesCS6B01G289500.1
TraesCS6D01G243000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17880.1	TraesCS1A01G215300.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1B01G228800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1D01G217800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6A01G262200.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6B01G289500.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6D01G243000.1	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G271600.1	Wheat	plastid	95.04	95.04
TraesCS7D01G271900.1	Wheat	plastid	92.91	92.91
HORVU7Hr1G057330.1	Barley	plastid	80.14	80.14
TraesCS7B01G446100.1	Wheat	mitochondrion, plastid	44.68	48.84
Os08t0548400-00	Rice	plastid	50.35	48.63
Zm00001d053213_P001	Maize	mitochondrion, plastid	48.23	48.57
Zm00001d032030_P001	Maize	plastid	47.52	48.55
KRH69778	Soybean	mitochondrion	34.04	47.06
KXG25435	Sorghum	plastid	49.65	46.98
TraesCS7B01G448500.1	Wheat	plastid	42.55	46.51
TraesCS7B01G445600.1	Wheat	plastid	45.39	46.38
TraesCS7B01G446000.1	Wheat	plastid	41.84	45.74
TraesCS7B01G445500.1	Wheat	plastid	44.68	45.32
TraesCS7B01G445700.1	Wheat	plastid	43.26	43.88
TraesCS7B01G445800.1	Wheat	plastid	43.26	43.57
TraesCS7B01G127100.1	Wheat	cytosol, mitochondrion	29.08	41.41
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	38.3	36.99
TraesCS4B01G226300.1	Wheat	plastid	41.84	35.98
CDY30342	Canola	plastid	39.01	35.71
KRH76655	Soybean	plastid	37.59	33.54
AT2G17880.1	Thale cress	plastid	37.59	33.12
KRH08066	Soybean	plastid	36.88	33.12
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	35.46	33.11
KRH28802	Soybean	plastid	36.88	32.91
Bra037247.1-P	Field mustard	plastid	35.46	32.47
Bra040872.1-P	Field mustard	plastid	36.17	32.08
PGSC0003DMT400061357	Potato	plastid	34.04	31.37
Solyc02g062160.1.1	Tomato	plastid	34.04	31.17
Bra017744.1-P	Field mustard	plastid	35.46	31.06
CDY26834	Canola	plastid	34.75	31.01
CDY07811	Canola	plastid	35.46	30.86
CDY29205	Canola	plastid	34.75	30.82
CDX69193	Canola	plastid	34.75	30.25
Bra011656.1-P	Field mustard	plastid	34.04	30.19
TraesCS7B01G445900.1	Wheat	mitochondrion, plastid	32.62	30.07
AT4G36040.1	Thale cress	plastid	34.04	29.81
KRH08065	Soybean	plastid	34.75	29.7
CDX72573	Canola	plastid	33.33	29.19
CDX75547	Canola	plastid	32.62	28.75
CDY34072	Canola	plastid	32.62	28.57
CDY24828	Canola	plastid	32.62	28.57
Bra010502.1-P	Field mustard	plastid	32.62	28.57
KRH38394	Soybean	plastid	27.66	28.06
KRH50148	Soybean	plastid	26.95	26.95
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	37.59	26.37
TraesCS4B01G226200.1	Wheat	plastid	33.33	26.26
PGSC0003DMT400009189	Potato	plastid	26.24	25.87
KRG99625	Soybean	plastid	24.11	25.76
KRH20682	Soybean	plastid	24.82	25.36
KRH69779	Soybean	mitochondrion	31.91	22.06

Protein Annotations

EnsemblPlants:TraesCS7B01G170400.1	EnsemblPlantsGene:TraesCS7B01G170400	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44240	PANTHER:PTHR44240:SF2	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	ScanProsite:PS00636	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2

Description

No Description!

Coordinates

chr7B:-:242665439..242665864

Molecular Weight (calculated)

15240.0 Da

IEP (calculated)

9.931

GRAVY (calculated)

-0.359

Length

141 amino acids

Sequence
(BLAST)

001: MISPPPVMQS SAARPALAVF RQAAACSSSR RTVRCAVSVA SAAPAGRCTL YEVLGLRAGA TGGEIKAAYR RLARERHPDV AGAAGDDFIR LHDAYATLSD
101: PDARARYDRD VVVQAYAQPP ASRPNGVWGR PRRTWETDQC W

Best Arabidopsis Sequence Match ( AT2G17880.1 )
(BLAST)

001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW

Arabidopsis Description

At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.