Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G221800.1 | Wheat | plastid | 95.96 | 87.16 |
| HORVU7Hr1G045280.1 | Barley | plastid | 89.9 | 80.18 |
| TraesCS7A01G220300.1 | Wheat | plastid | 87.88 | 79.82 |
| EER89648 | Sorghum | plastid | 65.66 | 63.11 |
| GSMUA_Achr9P19770_001 | Banana | plastid | 56.57 | 44.09 |
| GSMUA_Achr4P01700_001 | Banana | plastid | 55.56 | 42.64 |
| CDY44009 | Canola | cytosol | 23.23 | 42.59 |
| KRH14184 | Soybean | mitochondrion, plastid | 49.49 | 34.51 |
| VIT_19s0015g01370.t01 | Wine grape | plastid | 51.52 | 34.46 |
| KRG98415 | Soybean | plastid | 49.49 | 32.45 |
| TraesCS7B01G446100.1 | Wheat | mitochondrion, plastid | 39.39 | 30.23 |
| KRH46491 | Soybean | plastid | 47.47 | 30.13 |
| Solyc07g065960.1.1 | Tomato | plastid | 48.48 | 29.81 |
| Bra039384.1-P | Field mustard | plastid | 46.46 | 29.3 |
| PGSC0003DMT400056986 | Potato | plastid | 47.47 | 29.19 |
| TraesCS7B01G170400.1 | Wheat | plastid | 41.41 | 29.08 |
| CDY24196 | Canola | plastid | 46.46 | 28.93 |
| AT3G13310.1 | Thale cress | plastid | 44.44 | 28.03 |
| CDY23588 | Canola | plastid | 45.45 | 27.95 |
| CDX75702 | Canola | plastid | 45.45 | 27.95 |
| Bra001497.1-P | Field mustard | plastid | 44.44 | 27.85 |
| CDX82546 | Canola | plastid | 44.44 | 27.85 |
| CDY43357 | Canola | plastid | 44.44 | 27.67 |
| Bra034691.1-P | Field mustard | plastid | 44.44 | 27.67 |
| TraesCS7B01G445700.1 | Wheat | plastid | 38.38 | 27.34 |
| TraesCS7B01G446000.1 | Wheat | plastid | 35.35 | 27.13 |
| TraesCS7B01G448500.1 | Wheat | plastid | 34.34 | 26.36 |
| TraesCS7B01G445500.1 | Wheat | plastid | 36.36 | 25.9 |
| Solyc07g065970.1.1 | Tomato | mitochondrion | 42.42 | 25.61 |
| PGSC0003DMT400056985 | Potato | plastid | 42.42 | 25.61 |
| TraesCS7B01G445600.1 | Wheat | plastid | 35.35 | 25.36 |
| TraesCS7B01G445800.1 | Wheat | plastid | 35.35 | 25.0 |
| TraesCS7B01G445900.1 | Wheat | mitochondrion, plastid | 35.35 | 22.88 |
| TraesCS4B01G226300.1 | Wheat | plastid | 31.31 | 18.9 |
| TraesCS4B01G226200.1 | Wheat | plastid | 28.28 | 15.64 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G127100.1 | EnsemblPlantsGene:TraesCS7B01G127100 | Gene3D:1.10.287.110 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45432 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg |
| SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7B:-:151380442..151381075
Molecular Weight (calculated)
10810.9 Da
IEP (calculated)
9.707
GRAVY (calculated)
-0.330
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MVAAARPPAG SLYEALRVGR AATQVEIRTA YRSMAKRLHP DVASCGHGGP EAFLEIRRAY ETLSDPAARA RYDCSLGVFR GGGAGGVMRV RRWETDQCW
001: MAGTLVNSAG RFSPGNCILP QQRTARFYSG TARFPTGAPS FKASAQTLNA EPAVTESVRR RVSSLYELLK VNETASLTEI KTAYRSLAKV YHPDASESDG
101: RDFMEIHKAY ATLADPTTRA IYDSTLRVPR RRVHAGAMGR SGRVYATTRR WETDQCW
101: RDFMEIHKAY ATLADPTTRA IYDSTLRVPR RRVHAGAMGR SGRVYATTRR WETDQCW
Arabidopsis Description
At3g13310 [Source:UniProtKB/TrEMBL;Acc:Q9LTT7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.