Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 2
- vacuole 1
- cytosol 2
- plastid 4
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G127100.1 | Wheat | cytosol, mitochondrion | 63.11 | 65.66 |
| TraesCS7D01G221800.1 | Wheat | plastid | 65.05 | 61.47 |
| TraesCS7A01G220300.1 | Wheat | plastid | 64.08 | 60.55 |
| HORVU7Hr1G045280.1 | Barley | plastid | 63.11 | 58.56 |
| CDY44009 | Canola | cytosol | 22.33 | 42.59 |
| GSMUA_Achr9P19770_001 | Banana | plastid | 51.46 | 41.73 |
| GSMUA_Achr4P01700_001 | Banana | plastid | 49.51 | 39.53 |
| KRH14184 | Soybean | mitochondrion, plastid | 51.46 | 37.32 |
| VIT_19s0015g01370.t01 | Wine grape | plastid | 47.57 | 33.11 |
| KXG25435 | Sorghum | plastid | 46.6 | 32.21 |
| CDY24196 | Canola | plastid | 47.57 | 30.82 |
| KRG98415 | Soybean | plastid | 44.66 | 30.46 |
| Bra039384.1-P | Field mustard | plastid | 45.63 | 29.94 |
| Solyc07g065960.1.1 | Tomato | plastid | 46.6 | 29.81 |
| PGSC0003DMT400056986 | Potato | plastid | 46.6 | 29.81 |
| Bra001497.1-P | Field mustard | plastid | 45.63 | 29.75 |
| CDX82546 | Canola | plastid | 45.63 | 29.75 |
| Bra034691.1-P | Field mustard | plastid | 45.63 | 29.56 |
| CDX75702 | Canola | plastid | 45.63 | 29.19 |
| CDY43357 | Canola | plastid | 44.66 | 28.93 |
| EER88964 | Sorghum | plastid | 37.86 | 28.47 |
| KRH46491 | Soybean | plastid | 42.72 | 28.21 |
| CDY23588 | Canola | plastid | 43.69 | 27.95 |
| PGSC0003DMT400056985 | Potato | plastid | 43.69 | 27.44 |
| Solyc07g065970.1.1 | Tomato | mitochondrion | 43.69 | 27.44 |
| AT3G13310.1 | Thale cress | plastid | 41.75 | 27.39 |
| EER92566 | Sorghum | plastid | 38.84 | 25.16 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | UniProt:C5Z948 | InterPro:DnaJ_domain | EnsemblPlants:EER89648 | ProteinID:EER89648 |
| ProteinID:EER89648.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0009507 |
| GO:GO:0009536 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 | PRINTS:PR00625 |
| PFscan:PS50076 | PANTHER:PTHR45432 | SMART:SM00271 | EnsemblPlantsGene:SORBI_3010G125400 | SUPFAM:SSF46565 | UniParc:UPI0001A89AD5 |
| RefSeq:XP_002438281.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:15481793..15482414
Molecular Weight (calculated)
11141.3 Da
IEP (calculated)
10.614
GRAVY (calculated)
-0.367
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAVPLATA PALAAAGSLY EALRVGRAAT QVEIKVAYRA MAKRLHPDTS RSSRTAAAFL EIQRAYETLS NPDARAHYDR SLGPRPGAGG GMRVRRWETD
101: QCW
101: QCW
001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
Arabidopsis Description
At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.