Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G221800.1 | Wheat | plastid | 89.19 | 90.83 |
| TraesCS7B01G127100.1 | Wheat | cytosol, mitochondrion | 80.18 | 89.9 |
| TraesCS7A01G220300.1 | Wheat | plastid | 79.28 | 80.73 |
| EER89648 | Sorghum | plastid | 58.56 | 63.11 |
| CDY44009 | Canola | cytosol | 22.52 | 46.3 |
| GSMUA_Achr9P19770_001 | Banana | plastid | 52.25 | 45.67 |
| GSMUA_Achr4P01700_001 | Banana | plastid | 49.55 | 42.64 |
| VIT_19s0015g01370.t01 | Wine grape | plastid | 48.65 | 36.49 |
| KRH14184 | Soybean | mitochondrion, plastid | 43.24 | 33.8 |
| KRG98415 | Soybean | plastid | 45.95 | 33.77 |
| KRH46491 | Soybean | plastid | 45.95 | 32.69 |
| Bra039384.1-P | Field mustard | plastid | 44.14 | 31.21 |
| HORVU7Hr1G057330.1 | Barley | plastid | 39.64 | 31.21 |
| CDY24196 | Canola | plastid | 44.14 | 30.82 |
| CDY43357 | Canola | plastid | 43.24 | 30.19 |
| Bra034691.1-P | Field mustard | plastid | 43.24 | 30.19 |
| PGSC0003DMT400056986 | Potato | plastid | 43.24 | 29.81 |
| Solyc07g065960.1.1 | Tomato | plastid | 43.24 | 29.81 |
| CDX82546 | Canola | plastid | 42.34 | 29.75 |
| Bra001497.1-P | Field mustard | plastid | 42.34 | 29.75 |
| AT3G13310.1 | Thale cress | plastid | 41.44 | 29.3 |
| CDY23588 | Canola | plastid | 42.34 | 29.19 |
| CDX75702 | Canola | plastid | 42.34 | 29.19 |
| HORVU7Hr1G116960.1 | Barley | plastid | 35.14 | 28.68 |
| PGSC0003DMT400056985 | Potato | plastid | 39.64 | 26.83 |
| Solyc07g065970.1.1 | Tomato | mitochondrion | 39.64 | 26.83 |
| HORVU7Hr1G116890.2 | Barley | plastid | 33.33 | 26.43 |
| HORVU4Hr1G063590.1 | Barley | plastid | 29.73 | 19.08 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G045280.1 | EnsemblPlantsGene:HORVU7Hr1G045280 | Gene3D:1.10.287.110 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45432 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000B46FD5D | UniProt:A0A287WBD7 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr7H:-:142821725..142822606
Molecular Weight (calculated)
11870.1 Da
IEP (calculated)
9.913
GRAVY (calculated)
-0.303
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAAPVAPP MVSAARPAAG SLYEALRVGR SATQVEIRTA YRSMAKRLHP DVASCGHGYG GPEAFLEIRR AYETLSDPAA RARYDSSLGV FRGGGGGGVM
101: RVRRWETDQC W
101: RVRRWETDQC W
001: MAGTLVNSAG RFSPGNCILP QQRTARFYSG TARFPTGAPS FKASAQTLNA EPAVTESVRR RVSSLYELLK VNETASLTEI KTAYRSLAKV YHPDASESDG
101: RDFMEIHKAY ATLADPTTRA IYDSTLRVPR RRVHAGAMGR SGRVYATTRR WETDQCW
101: RDFMEIHKAY ATLADPTTRA IYDSTLRVPR RRVHAGAMGR SGRVYATTRR WETDQCW
Arabidopsis Description
At3g13310 [Source:UniProtKB/TrEMBL;Acc:Q9LTT7]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.