Factsheet for GSMUA_Achr9P19770_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G127100.1	Wheat	cytosol, mitochondrion	44.09	56.57
TraesCS7D01G221800.1	Wheat	plastid	46.46	54.13
TraesCS7A01G220300.1	Wheat	plastid	45.67	53.21
HORVU7Hr1G045280.1	Barley	plastid	45.67	52.25
EER89648	Sorghum	plastid	41.73	51.46
GSMUA_Achr4P01700_001	Banana	plastid	49.61	48.84
VIT_19s0015g01370.t01	Wine grape	plastid	47.24	40.54
CDY44009	Canola	cytosol	15.75	37.04
KRH14184	Soybean	mitochondrion, plastid	39.37	35.21
KRG98415	Soybean	plastid	41.73	35.1
PGSC0003DMT400056986	Potato	plastid	42.52	33.54
CDX75702	Canola	plastid	40.94	32.3
Bra001497.1-P	Field mustard	plastid	40.16	32.28
CDX82546	Canola	plastid	40.16	32.28
CDY43357	Canola	plastid	40.16	32.08
KRH46491	Soybean	plastid	39.37	32.05
CDY24196	Canola	plastid	39.37	31.45
Bra039384.1-P	Field mustard	plastid	38.58	31.21
Solyc07g065960.1.1	Tomato	plastid	39.37	31.06
CDY23588	Canola	plastid	39.37	31.06
Bra034691.1-P	Field mustard	plastid	38.58	30.82
GSMUA_Achr1P18570_001	Banana	mitochondrion	33.86	30.71
AT3G13310.1	Thale cress	plastid	37.01	29.94
GSMUA_Achr5P11400_001	Banana	plastid	34.65	28.57
GSMUA_Achr3P12640_001	Banana	plastid	29.13	27.82
PGSC0003DMT400056985	Potato	plastid	35.43	27.44
Solyc07g065970.1.1	Tomato	mitochondrion	35.43	27.44
GSMUA_Achr1P02450_001	Banana	plastid	31.5	27.03
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	29.13	25.34
GSMUA_Achr5P18850_001	Banana	plastid	28.35	21.05
GSMUA_Achr8P19450_001	Banana	plastid	28.35	20.45

Protein Annotations

EnsemblPlants:GSMUA_Achr9P19770_001	EnsemblPlants:GSMUA_Achr9T19770_001	EnsemblPlantsGene:GSMUA_Achr9G19770_001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45432	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	ScanProsite:PS00636	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002965443	UniProt:M0U1T6
MapMan:35.2	:	:	:	:	:

Description

Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G19770_001]

Coordinates

chr9:-:22354671..22355054

Molecular Weight (calculated)

13928.6 Da

IEP (calculated)

9.283

GRAVY (calculated)

-0.321

Length

127 amino acids

Sequence
(BLAST)

001: MAMSGGLNFA VLPPPVCISV RPRSVVALAA AEGTPETAER RARSLYEVLR VRETATAGEI KAAYRSMAKR FHPDVTAGRG GDDFVEIRRA YEALSDPAAR
101: ARYDLSIGRW RQGACGLSGR WETDQCW

Best Arabidopsis Sequence Match ( AT3G13310.1 )
(BLAST)

001: MAGTLVNSAG RFSPGNCILP QQRTARFYSG TARFPTGAPS FKASAQTLNA EPAVTESVRR RVSSLYELLK VNETASLTEI KTAYRSLAKV YHPDASESDG
101: RDFMEIHKAY ATLADPTTRA IYDSTLRVPR RRVHAGAMGR SGRVYATTRR WETDQCW

Arabidopsis Description

At3g13310 [Source:UniProtKB/TrEMBL;Acc:Q9LTT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.