Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- cytosol 2
- endoplasmic reticulum 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G054930.3 | |
| HORVU6Hr1G066640.4 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17880.1 | HORVU1Hr1G054930.3 | AT4G17680.1 | 21798944 |
| AT2G17880.1 | HORVU6Hr1G066640.4 | AT4G17680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G528700.1 | Wheat | plastid | 87.86 | 87.86 |
| TraesCS7D01G516700.1 | Wheat | plastid | 87.14 | 87.14 |
| TraesCS7D01G516600.1 | Wheat | plastid | 85.71 | 86.33 |
| TraesCS7A01G529000.1 | Wheat | plastid | 85.0 | 85.61 |
| TraesCS7A01G528800.1 | Wheat | plastid | 82.14 | 84.56 |
| TraesCS7D01G516900.1 | Wheat | plastid | 83.57 | 84.17 |
| TraesCS3D01G308300.1 | Wheat | plastid | 81.43 | 83.21 |
| TraesCS7B01G445500.1 | Wheat | plastid | 82.14 | 82.73 |
| HORVU7Hr1G116960.1 | Barley | plastid | 80.0 | 82.35 |
| TraesCS7A01G528900.1 | Wheat | plastid | 80.71 | 81.3 |
| TraesCS7B01G445700.1 | Wheat | plastid | 80.71 | 81.3 |
| TraesCS7D01G516800.1 | Wheat | plastid | 80.71 | 80.71 |
| TraesCS7B01G445600.1 | Wheat | plastid | 78.57 | 79.71 |
| TraesCS7D01G517000.1 | Wheat | plastid | 79.29 | 79.29 |
| TraesCS7B01G446100.1 | Wheat | mitochondrion, plastid | 71.43 | 77.52 |
| TraesCS7B01G445800.1 | Wheat | plastid | 77.14 | 77.14 |
| TraesCS7A01G529200.1 | Wheat | plastid | 76.43 | 76.43 |
| TraesCS7B01G446000.1 | Wheat | plastid | 70.0 | 75.97 |
| TraesCS7B01G448500.1 | Wheat | plastid | 60.71 | 65.89 |
| Zm00001d014790_P001 | Maize | plastid | 56.43 | 60.77 |
| Os06t0716100-01 | Rice | plastid | 56.43 | 59.4 |
| EER88964 | Sorghum | plastid | 53.57 | 54.74 |
| HORVU7Hr1G057330.1 | Barley | plastid | 47.86 | 47.52 |
| KRH69778 | Soybean | mitochondrion | 32.86 | 45.1 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 37.14 | 35.62 |
| HORVU4Hr1G063590.1 | Barley | plastid | 42.14 | 34.1 |
| HORVU7Hr1G045280.1 | Barley | plastid | 26.43 | 33.33 |
| KRH28802 | Soybean | plastid | 36.43 | 32.28 |
| KRH76655 | Soybean | plastid | 36.43 | 32.28 |
| Solyc02g062160.1.1 | Tomato | plastid | 35.0 | 31.82 |
| VIT_03s0038g02110.t01 | Wine grape | cytosol, nucleus, plastid | 34.29 | 31.79 |
| KRH08066 | Soybean | plastid | 35.0 | 31.21 |
| PGSC0003DMT400061357 | Potato | plastid | 32.86 | 30.07 |
| KRH38394 | Soybean | plastid | 29.29 | 29.5 |
| CDX69193 | Canola | plastid | 32.86 | 28.4 |
| Bra011656.1-P | Field mustard | plastid | 32.14 | 28.3 |
| CDX75547 | Canola | plastid | 32.14 | 28.12 |
| KRG99625 | Soybean | plastid | 26.43 | 28.03 |
| AT4G36040.1 | Thale cress | plastid | 32.14 | 27.95 |
| KRH08065 | Soybean | plastid | 32.86 | 27.88 |
| Bra017744.1-P | Field mustard | plastid | 31.43 | 27.33 |
| CDX72573 | Canola | plastid | 31.43 | 27.33 |
| Bra010502.1-P | Field mustard | plastid | 30.71 | 26.71 |
| CDY34072 | Canola | plastid | 30.71 | 26.71 |
| CDY24828 | Canola | plastid | 30.71 | 26.71 |
| CDY07811 | Canola | plastid | 30.71 | 26.54 |
| Bra040872.1-P | Field mustard | plastid | 30.0 | 26.42 |
| CDY29205 | Canola | plastid | 30.0 | 26.42 |
| AT2G17880.1 | Thale cress | plastid | 30.0 | 26.25 |
| KRH20682 | Soybean | plastid | 25.71 | 26.09 |
| CDY30342 | Canola | plastid | 28.57 | 25.97 |
| CDY26834 | Canola | plastid | 29.29 | 25.95 |
| Bra037247.1-P | Field mustard | plastid | 27.14 | 24.68 |
| PGSC0003DMT400009189 | Potato | plastid | 25.0 | 24.48 |
| KRH50148 | Soybean | plastid | 23.57 | 23.4 |
| VIT_04s0023g03470.t01 | Wine grape | cytosol, plastid | 32.14 | 22.39 |
| KRH69779 | Soybean | mitochondrion | 28.57 | 19.61 |
Protein Annotations
| EMBL:AK366304 | EnsemblPlants:HORVU7Hr1G116890.2 | EnsemblPlantsGene:HORVU7Hr1G116890 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44240 | PANTHER:PTHR44240:SF3 | PFAM:PF00226 |
| PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI000295C1F1 | UniProt:M0YI95 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:644298685..644300312
Molecular Weight (calculated)
14884.5 Da
IEP (calculated)
9.705
GRAVY (calculated)
-0.307
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFATSTAA VMGSAGPGRV AGPRRCMVAR ASSTMAATAT VAEGWTHYEV LGLGAGASRG EIKAAYRRLA REVHPDAVGG GDDEGFIRLH AAYATLADPD
101: ERARYDRSVA CRAAGMTMRR AASTSSPAFR RRTWETDQCW
101: ERARYDRSVA CRAAGMTMRR AASTSSPAFR RRTWETDQCW
001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
Arabidopsis Description
At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.