Factsheet for TraesCS7B01G445800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215300.1
TraesCS1B01G228800.1
TraesCS1D01G217800.1
TraesCS6A01G262200.1
TraesCS6B01G289500.1
TraesCS6D01G243000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17880.1	TraesCS1A01G215300.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1B01G228800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1D01G217800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6A01G262200.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6B01G289500.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6D01G243000.1	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G529200.1	Wheat	plastid	90.71	90.71
TraesCS7D01G517000.1	Wheat	plastid	87.14	87.14
HORVU7Hr1G116960.1	Barley	plastid	80.0	82.35
TraesCS7B01G445500.1	Wheat	plastid	79.29	79.86
TraesCS7B01G445700.1	Wheat	plastid	79.29	79.86
TraesCS7B01G445600.1	Wheat	plastid	76.43	77.54
TraesCS7B01G446100.1	Wheat	mitochondrion, plastid	71.43	77.52
HORVU7Hr1G116890.2	Barley	plastid	77.14	77.14
TraesCS7B01G446000.1	Wheat	plastid	70.0	75.97
TraesCS7B01G448500.1	Wheat	plastid	62.86	68.22
Zm00001d014790_P001	Maize	plastid	55.0	59.23
Os06t0716100-01	Rice	plastid	55.71	58.65
EER88964	Sorghum	plastid	53.57	54.74
KRH69778	Soybean	mitochondrion	32.86	45.1
TraesCS7B01G170400.1	Wheat	plastid	43.57	43.26
TraesCS7B01G445900.1	Wheat	mitochondrion, plastid	44.29	40.52
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	40.0	38.36
TraesCS4B01G226300.1	Wheat	plastid	43.57	37.2
TraesCS7B01G127100.1	Wheat	cytosol, mitochondrion	25.0	35.35
KRH28802	Soybean	plastid	36.43	32.28
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	34.29	31.79
KRH76655	Soybean	plastid	35.71	31.65
KRH08066	Soybean	plastid	33.57	29.94
KRH38394	Soybean	plastid	29.29	29.5
Solyc02g062160.1.1	Tomato	plastid	32.14	29.22
PGSC0003DMT400061357	Potato	plastid	31.43	28.76
AT4G36040.1	Thale cress	plastid	32.86	28.57
Bra017744.1-P	Field mustard	plastid	32.86	28.57
CDX69193	Canola	plastid	32.86	28.4
Bra011656.1-P	Field mustard	plastid	32.14	28.3
TraesCS4B01G226200.1	Wheat	plastid	35.71	27.93
CDX75547	Canola	plastid	31.43	27.5
CDX72573	Canola	plastid	31.43	27.33
KRG99625	Soybean	plastid	25.71	27.27
CDY26834	Canola	plastid	30.71	27.22
CDY24828	Canola	plastid	30.71	26.71
CDY34072	Canola	plastid	30.71	26.71
Bra010502.1-P	Field mustard	plastid	30.71	26.71
KRH08065	Soybean	plastid	31.43	26.67
CDY30342	Canola	plastid	29.29	26.62
Bra040872.1-P	Field mustard	plastid	30.0	26.42
Bra037247.1-P	Field mustard	plastid	28.57	25.97
AT2G17880.1	Thale cress	plastid	29.29	25.62
KRH20682	Soybean	plastid	25.0	25.36
CDY07811	Canola	plastid	29.29	25.31
CDY29205	Canola	plastid	28.57	25.16
PGSC0003DMT400009189	Potato	plastid	25.0	24.48
KRH50148	Soybean	plastid	22.86	22.7
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	30.71	21.39
KRH69779	Soybean	mitochondrion	26.43	18.14

Protein Annotations

EnsemblPlants:TraesCS7B01G445800.1	EnsemblPlantsGene:TraesCS7B01G445800	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44240	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2

Description

No Description!

Coordinates

chr7B:+:709395760..709396182

Molecular Weight (calculated)

14848.7 Da

IEP (calculated)

11.584

GRAVY (calculated)

-0.254

Length

140 amino acids

Sequence
(BLAST)

001: MAAAFASTAA VLRSARPGRV PIARRCVVAR ASATMAAPAG LAAGRTHYDV LGVSAGASRG EIKAAYRRLA RVVHPDTGGG GGDEGFIRLH AAYATLADPD
101: ERARYDRDVT SRAAGMMMRR ASATTGPAFR RRTWETDQCW

Best Arabidopsis Sequence Match ( AT2G17880.1 )
(BLAST)

001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW

Arabidopsis Description

At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.