CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75547	Canola	plastid	85.71	86.25
Bra017744.1-P	Field mustard	plastid	84.47	84.47
AT4G36040.1	Thale cress	plastid	83.85	83.85
CDX69193	Canola	plastid	80.12	79.63
CDY24828	Canola	plastid	77.02	77.02
CDY34072	Canola	plastid	75.78	75.78
CDY30342	Canola	plastid	61.49	64.29
CDY29205	Canola	plastid	63.35	64.15
CDY26834	Canola	plastid	62.73	63.92
KRH69778	Soybean	mitochondrion	40.37	63.73
CDY07811	Canola	plastid	62.11	61.73
KRH28802	Soybean	plastid	43.48	44.3
KRH76655	Soybean	plastid	42.86	43.67
GSMUA_Achr3P12640_001	Banana	plastid	34.78	42.11
KRH08066	Soybean	plastid	40.99	42.04
GSMUA_Achr1P18570_001	Banana	mitochondrion	36.02	41.43
CDY44009	Canola	cytosol	13.66	40.74
Solyc02g062160.1.1	Tomato	plastid	37.89	39.61
Zm00001d053213_P001	Maize	mitochondrion, plastid	34.16	39.29
KRG99625	Soybean	plastid	31.06	37.88
KRH38394	Soybean	plastid	32.3	37.41
GSMUA_Achr1P02450_001	Banana	plastid	34.16	37.16
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	34.78	37.09
PGSC0003DMT400009189	Potato	plastid	32.92	37.06
GSMUA_Achr5P11400_001	Banana	plastid	35.4	37.01
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	33.54	36.99
GSMUA_Achr5P18850_001	Banana	plastid	39.13	36.84
PGSC0003DMT400061357	Potato	plastid	34.78	36.6
KRH08065	Soybean	plastid	37.27	36.36
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	45.34	36.32
Zm00001d014790_P001	Maize	plastid	27.95	34.62
TraesCS4D01G226900.1	Wheat	plastid	36.02	34.32
KXG25435	Sorghum	plastid	31.68	34.23
Zm00001d032030_P001	Maize	plastid	29.19	34.06
HORVU7Hr1G057330.1	Barley	plastid	29.81	34.04
TraesCS7A01G271600.1	Wheat	plastid	29.81	34.04
TraesCS4A01G069100.1	Wheat	plastid	34.78	33.73
TraesCS7B01G170400.1	Wheat	plastid	29.19	33.33
Os03t0244950-00	Rice	mitochondrion, nucleus, plastid	35.4	33.33
KRH20682	Soybean	plastid	28.57	33.33
Os06t0716100-01	Rice	plastid	27.33	33.08
GSMUA_Achr8P19450_001	Banana	plastid	36.02	32.95
TraesCS4B01G226300.1	Wheat	plastid	33.54	32.93
TraesCS7D01G271900.1	Wheat	plastid	28.57	32.62
TraesCS7B01G445600.1	Wheat	plastid	27.95	32.61
TraesCS7B01G448500.1	Wheat	plastid	26.09	32.56
Zm00001d028404_P001	Maize	plastid	31.06	32.47
TraesCS7B01G445500.1	Wheat	plastid	27.95	32.37
HORVU7Hr1G116960.1	Barley	plastid	27.33	32.35
TraesCS7D01G516700.1	Wheat	plastid	27.95	32.14
TraesCS7A01G528700.1	Wheat	plastid	27.95	32.14
KRH50148	Soybean	plastid	27.95	31.91
TraesCS7B01G446100.1	Wheat	mitochondrion, plastid	25.47	31.78
TraesCS7D01G516600.1	Wheat	plastid	27.33	31.65
TraesCS7A01G528800.1	Wheat	plastid	26.71	31.62
TraesCS7A01G529400.1	Wheat	plastid	25.47	31.54
EER92566	Sorghum	plastid	31.06	31.45
HORVU7Hr1G116890.2	Barley	plastid	27.33	31.43
TraesCS7B01G445800.1	Wheat	plastid	27.33	31.43
TraesCS7A01G529200.1	Wheat	plastid	27.33	31.43
EER88964	Sorghum	plastid	26.71	31.39
TraesCS7B01G446000.1	Wheat	plastid	24.84	31.01
TraesCS4B01G226200.1	Wheat	plastid	34.16	30.73
TraesCS7D01G517000.1	Wheat	plastid	26.71	30.71
TraesCS7D01G516800.1	Wheat	plastid	26.71	30.71
CDY23588	Canola	plastid	30.43	30.43
CDX75702	Canola	plastid	30.43	30.43
CDX82546	Canola	plastid	29.81	30.38
TraesCS7B01G445700.1	Wheat	plastid	26.09	30.22
TraesCS7A01G528900.1	Wheat	plastid	26.09	30.22
TraesCS7A01G529000.1	Wheat	plastid	26.09	30.22
CDY24196	Canola	plastid	29.81	30.19
Os08t0548400-00	Rice	plastid	27.33	30.14
HORVU4Hr1G063590.1	Barley	plastid	32.3	30.06
CDY43357	Canola	plastid	28.57	28.93
TraesCS7D01G516900.1	Wheat	plastid	24.84	28.78
TraesCS3D01G308300.1	Wheat	plastid	23.6	27.74
KRH69779	Soybean	mitochondrion	33.54	26.47
TraesCS7B01G445900.1	Wheat	mitochondrion, plastid	22.36	23.53

Protein Annotations

EnsemblPlants:CDX72573	EnsemblPlantsGene:GSBRNA2T00100111001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR44240	PANTHER:PTHR44240:SF1	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
ProteinID:CDX72573	ProteinID:CDX72573.1	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0004EC3440
MapMan:35.1	:	:	:	:	:

Description

BnaC07g45950D

Coordinates

chrLK031796:-:1905563..1906298

Molecular Weight (calculated)

17855.1 Da

IEP (calculated)

9.281

GRAVY (calculated)

-0.576

Length

161 amino acids

Sequence
(BLAST)

001: MLSSSPTSFT HPFLSTSPPL SPISPPSRSP RLPPPLVSAS CSYTCTEDPP RLHQIPRRTT PATASLYEIL EVPRGATGQD IKSAYRRLAR ICHPDVAAGT
101: DRSNSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVSTSGMGSY VGRNWETDQC W

Best Arabidopsis Sequence Match ( AT4G36040.1 )
(BLAST)

001: MLSSSPTSFT HPFLSSSPPL SPISPPSRTA RISPPLVSAS CSYTYTEDSP RLHQIPRRLT TVPASLYDVL EVPLGATSQD IKSAYRRLAR ICHPDVAGTD
101: RTSSSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W

Arabidopsis Description

ATJ11At4g36040 [Source:UniProtKB/TrEMBL;Acc:Q1H544]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.