Factsheet for TraesCS7A01G528800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215300.1
TraesCS1B01G228800.1
TraesCS1D01G217800.1
TraesCS6A01G262200.1
TraesCS6B01G289500.1
TraesCS6D01G243000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17880.1	TraesCS1A01G215300.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1B01G228800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1D01G217800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6A01G262200.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6B01G289500.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6D01G243000.1	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G528700.1	Wheat	plastid	88.97	86.43
TraesCS7B01G445500.1	Wheat	plastid	85.29	83.45
TraesCS7A01G529000.1	Wheat	plastid	84.56	82.73
HORVU7Hr1G116890.2	Barley	plastid	84.56	82.14
TraesCS7D01G516800.1	Wheat	plastid	83.82	81.43
HORVU7Hr1G116960.1	Barley	plastid	80.15	80.15
TraesCS7A01G528900.1	Wheat	plastid	80.15	78.42
TraesCS7A01G529200.1	Wheat	plastid	76.47	74.29
TraesCS7A01G529400.1	Wheat	plastid	58.82	61.54
Os06t0716100-01	Rice	plastid	57.35	58.65
Zm00001d014790_P001	Maize	plastid	55.15	57.69
EER88964	Sorghum	plastid	54.41	54.01
TraesCS7A01G271600.1	Wheat	plastid	43.38	41.84
KRH69778	Soybean	mitochondrion	30.15	40.2
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	38.97	36.3
TraesCS4A01G069100.1	Wheat	plastid	41.91	34.34
TraesCS7A01G220300.1	Wheat	plastid	27.21	33.95
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	34.56	31.13
KRH76655	Soybean	plastid	36.03	31.01
KRH28802	Soybean	plastid	35.29	30.38
Solyc02g062160.1.1	Tomato	plastid	33.09	29.22
KRH38394	Soybean	plastid	29.41	28.78
KRH08066	Soybean	plastid	32.35	28.03
Bra011656.1-P	Field mustard	plastid	32.35	27.67
AT4G36040.1	Thale cress	plastid	32.35	27.33
KRG99625	Soybean	plastid	26.47	27.27
CDX69193	Canola	plastid	32.35	27.16
CDX75547	Canola	plastid	31.62	26.88
PGSC0003DMT400061357	Potato	plastid	30.15	26.8
Bra017744.1-P	Field mustard	plastid	31.62	26.71
CDX72573	Canola	plastid	31.62	26.71
Bra010502.1-P	Field mustard	plastid	30.88	26.09
CDY34072	Canola	plastid	30.88	26.09
CDY24828	Canola	plastid	30.88	26.09
KRH20682	Soybean	plastid	25.74	25.36
CDY07811	Canola	plastid	29.41	24.69
CDY26834	Canola	plastid	28.68	24.68
Bra040872.1-P	Field mustard	plastid	28.68	24.53
CDY29205	Canola	plastid	28.68	24.53
AT2G17880.1	Thale cress	plastid	28.68	24.38
KRH08065	Soybean	plastid	29.41	24.24
CDY30342	Canola	plastid	26.47	23.38
Bra037247.1-P	Field mustard	plastid	26.47	23.38
PGSC0003DMT400009189	Potato	plastid	24.26	23.08
KRH50148	Soybean	plastid	22.79	21.99
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	29.41	19.9
KRH69779	Soybean	mitochondrion	23.53	15.69

Protein Annotations

EnsemblPlants:TraesCS7A01G528800.1	EnsemblPlantsGene:TraesCS7A01G528800	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44240	PANTHER:PTHR44240:SF2	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:709028593..709029397

Molecular Weight (calculated)

14476.2 Da

IEP (calculated)

10.056

GRAVY (calculated)

-0.201

Length

136 amino acids

Sequence
(BLAST)

001: MATFATSTAA VMGSARPGRV AGPRRCVAAQ ASSTIAAVAV GRTHYEVLGV GSGASRGEIK AAYRRLAREV QPDAAVGGGD EGFIRLHAAY ATLADPDERT
101: RYDRDVACRA AGMMMRRAAV AGPAFWRRTW ETDQCW

Best Arabidopsis Sequence Match ( AT2G17880.1 )
(BLAST)

001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW

Arabidopsis Description

At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.