Factsheet for HORVU7Hr1G116960.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
nucleus 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G054930.3
HORVU6Hr1G066640.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17880.1	HORVU1Hr1G054930.3	AT4G17680.1	21798944
AT2G17880.1	HORVU6Hr1G066640.4	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G529000.1	Wheat	plastid	85.29	83.45
TraesCS7D01G516600.1	Wheat	plastid	83.82	82.01
TraesCS7D01G516700.1	Wheat	plastid	83.82	81.43
TraesCS7D01G516900.1	Wheat	plastid	83.09	81.3
TraesCS7D01G517000.1	Wheat	plastid	83.09	80.71
TraesCS7A01G528700.1	Wheat	plastid	83.09	80.71
TraesCS7A01G528800.1	Wheat	plastid	80.15	80.15
TraesCS7A01G529200.1	Wheat	plastid	82.35	80.0
HORVU7Hr1G116890.2	Barley	plastid	82.35	80.0
TraesCS7B01G445800.1	Wheat	plastid	82.35	80.0
TraesCS7B01G445700.1	Wheat	plastid	81.62	79.86
TraesCS7B01G445500.1	Wheat	plastid	81.62	79.86
TraesCS7B01G445600.1	Wheat	plastid	80.88	79.71
TraesCS3D01G308300.1	Wheat	plastid	80.15	79.56
TraesCS7A01G528900.1	Wheat	plastid	80.88	79.14
TraesCS7B01G446000.1	Wheat	plastid	73.53	77.52
TraesCS7B01G446100.1	Wheat	mitochondrion, plastid	73.53	77.52
TraesCS7D01G516800.1	Wheat	plastid	79.41	77.14
TraesCS7B01G448500.1	Wheat	plastid	65.44	68.99
Os06t0716100-01	Rice	plastid	58.82	60.15
Zm00001d014790_P001	Maize	plastid	55.88	58.46
EER88964	Sorghum	plastid	58.09	57.66
HORVU7Hr1G057330.1	Barley	plastid	50.74	48.94
KRH69778	Soybean	mitochondrion	32.35	43.14
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	42.65	39.73
HORVU7Hr1G045280.1	Barley	plastid	28.68	35.14
HORVU4Hr1G063590.1	Barley	plastid	44.12	34.68
KRH76655	Soybean	plastid	37.5	32.28
KRH28802	Soybean	plastid	36.76	31.65
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	34.56	31.13
Solyc02g062160.1.1	Tomato	plastid	33.82	29.87
PGSC0003DMT400061357	Potato	plastid	32.35	28.76
KRH08066	Soybean	plastid	33.09	28.66
Bra011656.1-P	Field mustard	plastid	33.09	28.3
KRH38394	Soybean	plastid	28.68	28.06
AT4G36040.1	Thale cress	plastid	33.09	27.95
Bra017744.1-P	Field mustard	plastid	33.09	27.95
CDX69193	Canola	plastid	33.09	27.78
AT2G17880.1	Thale cress	plastid	32.35	27.5
CDX75547	Canola	plastid	32.35	27.5
CDX72573	Canola	plastid	32.35	27.33
CDY30342	Canola	plastid	30.88	27.27
CDY26834	Canola	plastid	31.62	27.22
CDY07811	Canola	plastid	32.35	27.16
Bra040872.1-P	Field mustard	plastid	31.62	27.04
CDY29205	Canola	plastid	31.62	27.04
CDY24828	Canola	plastid	31.62	26.71
Bra010502.1-P	Field mustard	plastid	31.62	26.71
CDY34072	Canola	plastid	31.62	26.71
KRG99625	Soybean	plastid	25.74	26.52
KRH08065	Soybean	plastid	31.62	26.06
Bra037247.1-P	Field mustard	plastid	29.41	25.97
PGSC0003DMT400009189	Potato	plastid	26.47	25.17
KRH50148	Soybean	plastid	25.74	24.82
KRH20682	Soybean	plastid	24.26	23.91
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	30.88	20.9
KRH69779	Soybean	mitochondrion	27.21	18.14

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.2	EMBL:AK366304	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	UniProt:F2DQY6
EnsemblPlantsGene:HORVU7Hr1G116960	EnsemblPlants:HORVU7Hr1G116960.1	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44240	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI0002007361	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DQY6]

Coordinates

chrchr7H:+:644403688..644405108

Molecular Weight (calculated)

14484.2 Da

IEP (calculated)

11.363

GRAVY (calculated)

-0.237

Length

136 amino acids

Sequence
(BLAST)

001: MAAAFASTPA VLGSARPGRV AGVRRSVVVR ASSTVAVAIG RTHYEVLGLG AGASRGEIKA AYRRLAREVH PDAVGGGGDE GFIRLHAAYA TLADPDERAR
101: YDRDVTCRAA GMTMRRRAAA AGPAFRRRTW ETDQCW

Best Arabidopsis Sequence Match ( AT2G17880.1 )
(BLAST)

001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW

Arabidopsis Description

At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.