Factsheet for TraesCS7D01G516900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215300.1
TraesCS1B01G228800.1
TraesCS1D01G217800.1
TraesCS6A01G262200.1
TraesCS6B01G289500.1
TraesCS6D01G243000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17880.1	TraesCS1A01G215300.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1B01G228800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1D01G217800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6A01G262200.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6B01G289500.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6D01G243000.1	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G308300.1	Wheat	plastid	95.68	97.08
TraesCS7A01G529000.1	Wheat	plastid	94.24	94.24
TraesCS7D01G516600.1	Wheat	plastid	89.21	89.21
TraesCS7B01G445700.1	Wheat	plastid	87.77	87.77
TraesCS7A01G528900.1	Wheat	plastid	86.33	86.33
TraesCS7D01G516700.1	Wheat	plastid	85.61	85.0
HORVU7Hr1G116890.2	Barley	plastid	84.17	83.57
HORVU7Hr1G116960.1	Barley	plastid	81.3	83.09
TraesCS7D01G516800.1	Wheat	plastid	83.45	82.86
TraesCS7D01G517000.1	Wheat	plastid	82.01	81.43
Os06t0716100-01	Rice	plastid	60.43	63.16
Zm00001d014790_P001	Maize	plastid	56.83	60.77
EER88964	Sorghum	plastid	55.4	56.2
TraesCS7D01G271900.1	Wheat	plastid	48.2	47.52
KRH69778	Soybean	mitochondrion	31.65	43.14
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	41.73	39.73
TraesCS4D01G226900.1	Wheat	plastid	44.6	36.69
TraesCS7D01G221800.1	Wheat	plastid	25.9	33.03
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	35.25	32.45
KRH76655	Soybean	plastid	35.97	31.65
KRH28802	Soybean	plastid	35.25	31.01
Solyc02g062160.1.1	Tomato	plastid	33.81	30.52
PGSC0003DMT400061357	Potato	plastid	32.37	29.41
KRH08066	Soybean	plastid	33.09	29.3
KRH38394	Soybean	plastid	27.34	27.34
AT2G17880.1	Thale cress	plastid	30.94	26.88
CDX75547	Canola	plastid	30.94	26.88
CDY30342	Canola	plastid	29.5	26.62
CDY26834	Canola	plastid	30.22	26.58
CDX69193	Canola	plastid	30.94	26.54
KRG99625	Soybean	plastid	25.18	26.52
CDY29205	Canola	plastid	30.22	26.42
Bra011656.1-P	Field mustard	plastid	30.22	26.42
Bra040872.1-P	Field mustard	plastid	30.22	26.42
CDY24828	Canola	plastid	30.22	26.09
CDY34072	Canola	plastid	30.22	26.09
Bra010502.1-P	Field mustard	plastid	30.22	26.09
KRH08065	Soybean	plastid	30.94	26.06
CDY07811	Canola	plastid	30.22	25.93
PGSC0003DMT400009189	Potato	plastid	26.62	25.87
Bra017744.1-P	Field mustard	plastid	29.5	25.47
AT4G36040.1	Thale cress	plastid	29.5	25.47
Bra037247.1-P	Field mustard	plastid	28.06	25.32
CDX72573	Canola	plastid	28.78	24.84
KRH50148	Soybean	plastid	25.18	24.82
KRH20682	Soybean	plastid	23.74	23.91
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	30.94	21.39
KRH69779	Soybean	mitochondrion	26.62	18.14

Protein Annotations

EnsemblPlants:TraesCS7D01G516900.1	EnsemblPlantsGene:TraesCS7D01G516900	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44240	PANTHER:PTHR44240:SF2	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:616134401..616134820

Molecular Weight (calculated)

14701.5 Da

IEP (calculated)

10.010

GRAVY (calculated)

-0.211

Length

139 amino acids

Sequence
(BLAST)

001: MATFATSSSA VMWSARPGQV AGARRCVVAR ASAAMAAPAA VATGRTHYEV LGLGAGASKG EIKAAYRRLA REVHPDAVGG GGDEGFIRLH AAYATLADPD
101: ERARYDRDVT CRAAGMMMQR AAAAGPAFRR RTWETDQCW

Best Arabidopsis Sequence Match ( AT2G17880.1 )
(BLAST)

001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW

Arabidopsis Description

At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.