Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 2
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT2G17880.1 | CDX90458 | AT4G17680.1 | 21798944 |
AT2G17880.1 | CDY09609 | AT4G17680.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY30342 | Canola | plastid | 77.85 | 79.87 |
AT2G17880.1 | Thale cress | plastid | 70.25 | 69.38 |
CDX75547 | Canola | plastid | 66.46 | 65.62 |
CDX69193 | Canola | plastid | 65.19 | 63.58 |
CDX72573 | Canola | plastid | 63.92 | 62.73 |
CDY07811 | Canola | plastid | 63.92 | 62.35 |
CDY29205 | Canola | plastid | 62.66 | 62.26 |
CDY24828 | Canola | plastid | 62.03 | 60.87 |
CDY34072 | Canola | plastid | 61.39 | 60.25 |
KRH69778 | Soybean | mitochondrion | 36.08 | 55.88 |
KRH28802 | Soybean | plastid | 45.57 | 45.57 |
KRH76655 | Soybean | plastid | 44.94 | 44.94 |
CDY44009 | Canola | cytosol | 13.92 | 40.74 |
KRH08066 | Soybean | plastid | 39.87 | 40.13 |
Zm00001d053213_P001 | Maize | mitochondrion, plastid | 34.18 | 38.57 |
GSMUA_Achr1P18570_001 | Banana | mitochondrion | 34.18 | 38.57 |
Solyc02g062160.1.1 | Tomato | plastid | 37.34 | 38.31 |
VIT_03s0038g02110.t01 | Wine grape | cytosol, nucleus, plastid | 36.08 | 37.75 |
HORVU7Hr1G057330.1 | Barley | plastid | 33.54 | 37.59 |
KRH38394 | Soybean | plastid | 32.91 | 37.41 |
Zm00001d014790_P001 | Maize | plastid | 30.38 | 36.92 |
GSMUA_Achr3P12640_001 | Banana | plastid | 31.01 | 36.84 |
KRG99625 | Soybean | plastid | 30.38 | 36.36 |
KRH08065 | Soybean | plastid | 37.34 | 35.76 |
KXG25435 | Sorghum | plastid | 33.54 | 35.57 |
KRH20682 | Soybean | plastid | 31.01 | 35.51 |
TraesCS7D01G271900.1 | Wheat | plastid | 31.65 | 35.46 |
GSMUA_Achr5P11400_001 | Banana | plastid | 34.18 | 35.06 |
Zm00001d032030_P001 | Maize | plastid | 30.38 | 34.78 |
TraesCS7B01G170400.1 | Wheat | plastid | 31.01 | 34.75 |
PGSC0003DMT400061357 | Potato | plastid | 33.54 | 34.64 |
GSMUA_Achr1P02450_001 | Banana | plastid | 32.28 | 34.46 |
PGSC0003DMT400009189 | Potato | plastid | 31.01 | 34.27 |
TraesCS7A01G271600.1 | Wheat | plastid | 30.38 | 34.04 |
TraesCS4D01G226900.1 | Wheat | plastid | 36.08 | 33.73 |
GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 31.01 | 33.56 |
TraesCS7B01G448500.1 | Wheat | plastid | 27.22 | 33.33 |
EER88964 | Sorghum | plastid | 28.48 | 32.85 |
VIT_04s0023g03470.t01 | Wine grape | cytosol, plastid | 41.77 | 32.84 |
GSMUA_Achr5P18850_001 | Banana | plastid | 35.44 | 32.75 |
KRH50148 | Soybean | plastid | 29.11 | 32.62 |
TraesCS7B01G446100.1 | Wheat | mitochondrion, plastid | 26.58 | 32.56 |
TraesCS7B01G445500.1 | Wheat | plastid | 28.48 | 32.37 |
TraesCS4B01G226300.1 | Wheat | plastid | 33.54 | 32.32 |
TraesCS7A01G529400.1 | Wheat | plastid | 26.58 | 32.31 |
Os03t0244950-00 | Rice | mitochondrion, nucleus, plastid | 34.81 | 32.16 |
EER92566 | Sorghum | plastid | 32.28 | 32.08 |
TraesCS4A01G069100.1 | Wheat | plastid | 33.54 | 31.93 |
HORVU7Hr1G116960.1 | Barley | plastid | 27.22 | 31.62 |
Os08t0548400-00 | Rice | plastid | 29.11 | 31.51 |
TraesCS7A01G529200.1 | Wheat | plastid | 27.85 | 31.43 |
Zm00001d028404_P001 | Maize | plastid | 30.38 | 31.17 |
TraesCS7B01G445600.1 | Wheat | plastid | 27.22 | 31.16 |
TraesCS7B01G445700.1 | Wheat | plastid | 27.22 | 30.94 |
TraesCS7D01G516600.1 | Wheat | plastid | 27.22 | 30.94 |
TraesCS7A01G528900.1 | Wheat | plastid | 27.22 | 30.94 |
TraesCS7A01G529000.1 | Wheat | plastid | 27.22 | 30.94 |
TraesCS7B01G445800.1 | Wheat | plastid | 27.22 | 30.71 |
TraesCS7A01G528700.1 | Wheat | plastid | 27.22 | 30.71 |
TraesCS7D01G516900.1 | Wheat | plastid | 26.58 | 30.22 |
GSMUA_Achr8P19450_001 | Banana | plastid | 33.54 | 30.11 |
Os06t0716100-01 | Rice | plastid | 25.32 | 30.08 |
TraesCS7D01G517000.1 | Wheat | plastid | 26.58 | 30.0 |
HORVU4Hr1G063590.1 | Barley | plastid | 32.28 | 29.48 |
TraesCS7B01G446000.1 | Wheat | plastid | 24.05 | 29.46 |
HORVU7Hr1G116890.2 | Barley | plastid | 25.95 | 29.29 |
TraesCS7D01G516700.1 | Wheat | plastid | 25.95 | 29.29 |
TraesCS7D01G516800.1 | Wheat | plastid | 25.95 | 29.29 |
TraesCS3D01G308300.1 | Wheat | plastid | 25.32 | 29.2 |
TraesCS7A01G528800.1 | Wheat | plastid | 24.68 | 28.68 |
CDY24196 | Canola | plastid | 28.48 | 28.3 |
CDY23588 | Canola | plastid | 28.48 | 27.95 |
CDY43357 | Canola | plastid | 27.22 | 27.04 |
TraesCS4B01G226200.1 | Wheat | plastid | 30.38 | 26.82 |
CDX75702 | Canola | plastid | 27.22 | 26.71 |
CDX82546 | Canola | plastid | 26.58 | 26.58 |
TraesCS7B01G445900.1 | Wheat | mitochondrion, plastid | 22.78 | 23.53 |
KRH69779 | Soybean | mitochondrion | 30.38 | 23.53 |
Protein Annotations
EnsemblPlants:CDY26834 | EnsemblPlantsGene:GSBRNA2T00035791001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
InterPro:J_dom_sf | PANTHER:PTHR44240 | PANTHER:PTHR44240:SF1 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
ProteinID:CDY26834 | ProteinID:CDY26834.1 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EF2B62 |
UniProt:A0A078GNL0 | MapMan:35.1 | : | : | : | : |
Description
BnaC09g09610DBnaC09g09610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNL0]
Coordinates
chrLK032194:-:525253..525898
Molecular Weight (calculated)
17123.1 Da
IEP (calculated)
9.321
GRAVY (calculated)
-0.416
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSSPTFFA PPFLSSSPPS LSPPSRTSRP SPSLSATATT TASSRYTCAD DPPRRQIPQR LSAAASLYEI LEIPVGSTSQ EIKSAYRRLA RICHPDVAGN
101: GRSAGEFVKI HAAYCTLSDP EKRAVYDRRI LRRSRPLSAG VSGFDSCVGG NWETDQCW
101: GRSAGEFVKI HAAYCTLSDP EKRAVYDRRI LRRSRPLSAG VSGFDSCVGG NWETDQCW
001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
Arabidopsis Description
At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.