CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010502.1-P	Field mustard	plastid	99.38	99.38
CDY34072	Canola	plastid	93.17	93.17
AT4G36040.1	Thale cress	plastid	82.61	82.61
CDX75547	Canola	plastid	78.88	79.38
CDX69193	Canola	plastid	78.88	78.4
CDX72573	Canola	plastid	77.02	77.02
CDY26834	Canola	plastid	60.87	62.03
KRH69778	Soybean	mitochondrion	39.13	61.76
CDY30342	Canola	plastid	57.76	60.39
CDY29205	Canola	plastid	59.01	59.75
CDY07811	Canola	plastid	59.01	58.64
KRH28802	Soybean	plastid	41.61	42.41
KRH76655	Soybean	plastid	40.99	41.77
CDY44009	Canola	cytosol	13.66	40.74
GSMUA_Achr3P12640_001	Banana	plastid	33.54	40.6
KRH08066	Soybean	plastid	39.13	40.13
GSMUA_Achr1P18570_001	Banana	mitochondrion	32.92	37.86
GSMUA_Achr1P02450_001	Banana	plastid	34.78	37.84
Zm00001d014790_P001	Maize	plastid	30.43	37.69
Zm00001d053213_P001	Maize	mitochondrion, plastid	32.3	37.14
Solyc02g062160.1.1	Tomato	plastid	35.4	37.01
KRH38394	Soybean	plastid	31.68	36.69
GSMUA_Achr5P11400_001	Banana	plastid	34.78	36.36
HORVU7Hr1G057330.1	Barley	plastid	31.06	35.46
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	32.92	35.1
KRG99625	Soybean	plastid	28.57	34.85
KRH08065	Soybean	plastid	35.4	34.55
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	31.06	34.25
TraesCS7B01G445600.1	Wheat	plastid	29.19	34.06
TraesCS7A01G271600.1	Wheat	plastid	29.81	34.04
PGSC0003DMT400061357	Potato	plastid	32.3	33.99
Os06t0716100-01	Rice	plastid	27.95	33.83
TraesCS7D01G271900.1	Wheat	plastid	29.19	33.33
KRH20682	Soybean	plastid	28.57	33.33
EER92566	Sorghum	plastid	32.92	33.33
GSMUA_Achr5P18850_001	Banana	plastid	35.4	33.33
Os03t0244950-00	Rice	mitochondrion, nucleus, plastid	35.4	33.33
TraesCS4D01G226900.1	Wheat	plastid	34.78	33.14
TraesCS7A01G529400.1	Wheat	plastid	26.71	33.08
TraesCS4B01G226300.1	Wheat	plastid	33.54	32.93
KXG25435	Sorghum	plastid	30.43	32.89
TraesCS7A01G529200.1	Wheat	plastid	28.57	32.86
TraesCS7B01G170400.1	Wheat	plastid	28.57	32.62
TraesCS7B01G446100.1	Wheat	mitochondrion, plastid	26.09	32.56
TraesCS7D01G516600.1	Wheat	plastid	27.95	32.37
TraesCS7B01G445500.1	Wheat	plastid	27.95	32.37
TraesCS7A01G528700.1	Wheat	plastid	27.95	32.14
TraesCS4A01G069100.1	Wheat	plastid	32.92	31.93
KRH50148	Soybean	plastid	27.95	31.91
Zm00001d032030_P001	Maize	plastid	27.33	31.88
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	39.75	31.84
Zm00001d028404_P001	Maize	plastid	30.43	31.82
HORVU7Hr1G116960.1	Barley	plastid	26.71	31.62
PGSC0003DMT400009189	Potato	plastid	27.95	31.47
TraesCS7D01G516700.1	Wheat	plastid	27.33	31.43
EER88964	Sorghum	plastid	26.71	31.39
GSMUA_Achr8P19450_001	Banana	plastid	34.16	31.25
TraesCS7B01G448500.1	Wheat	plastid	24.84	31.01
TraesCS7A01G528800.1	Wheat	plastid	26.09	30.88
TraesCS7D01G516800.1	Wheat	plastid	26.71	30.71
HORVU7Hr1G116890.2	Barley	plastid	26.71	30.71
TraesCS7B01G445800.1	Wheat	plastid	26.71	30.71
TraesCS7B01G446000.1	Wheat	plastid	24.22	30.23
TraesCS7D01G516900.1	Wheat	plastid	26.09	30.22
TraesCS7B01G445700.1	Wheat	plastid	26.09	30.22
CDY24196	Canola	plastid	29.81	30.19
TraesCS7D01G517000.1	Wheat	plastid	26.09	30.0
TraesCS4B01G226200.1	Wheat	plastid	32.92	29.61
CDY43357	Canola	plastid	29.19	29.56
TraesCS7A01G529000.1	Wheat	plastid	25.47	29.5
TraesCS7A01G528900.1	Wheat	plastid	25.47	29.5
HORVU4Hr1G063590.1	Barley	plastid	31.68	29.48
CDX75702	Canola	plastid	29.19	29.19
CDX82546	Canola	plastid	28.57	29.11
Os08t0548400-00	Rice	plastid	26.09	28.77
CDY23588	Canola	plastid	27.95	27.95
TraesCS3D01G308300.1	Wheat	plastid	23.6	27.74
TraesCS7B01G445900.1	Wheat	mitochondrion, plastid	22.36	23.53
KRH69779	Soybean	mitochondrion	29.81	23.53

Protein Annotations

Gene3D:1.10.287.110	MapMan:35.1	UniProt:A0A078GJP5	EnsemblPlants:CDY24828	ProteinID:CDY24828	ProteinID:CDY24828.1
InterPro:DnaJ_domain	EnsemblPlantsGene:GSBRNA2T00027300001	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR44240	PANTHER:PTHR44240:SF1	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI0004EE2F74	SEG:seg	:	:	:	:

Description

BnaA08g14820DBnaA08g14820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJP5]

Coordinates

chrLK032164:-:431162..431847

Molecular Weight (calculated)

17785.9 Da

IEP (calculated)

8.998

GRAVY (calculated)

-0.497

Length

161 amino acids

Sequence
(BLAST)

001: MFSSSPTSFA HTLLSSPPLS PVSPPSRTTK ISPLLASASC SYTCAEDSPR LHQLQRRLTT ATASLYEILE VPHGASPQDI KSAYRRLARI CHPDVAGTDR
101: TSSSSSGDEF MKIHAAYCTL SDPEKRSLYD RRMLRRSRPL TVSTSGMGSY VGRNWETDQC W

Best Arabidopsis Sequence Match ( AT4G36040.1 )
(BLAST)

001: MLSSSPTSFT HPFLSSSPPL SPISPPSRTA RISPPLVSAS CSYTYTEDSP RLHQIPRRLT TVPASLYDVL EVPLGATSQD IKSAYRRLAR ICHPDVAGTD
101: RTSSSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W

Arabidopsis Description

ATJ11At4g36040 [Source:UniProtKB/TrEMBL;Acc:Q1H544]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.