Factsheet for TraesCS7A01G529200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215300.1
TraesCS1B01G228800.1
TraesCS1D01G217800.1
TraesCS6A01G262200.1
TraesCS6B01G289500.1
TraesCS6D01G243000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17880.1	TraesCS1A01G215300.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1B01G228800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1D01G217800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6A01G262200.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6B01G289500.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6D01G243000.1	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G445800.1	Wheat	plastid	90.71	90.71
TraesCS7D01G517000.1	Wheat	plastid	87.86	87.86
TraesCS7A01G529000.1	Wheat	plastid	82.14	82.73
HORVU7Hr1G116960.1	Barley	plastid	80.0	82.35
TraesCS7A01G528700.1	Wheat	plastid	82.14	82.14
TraesCS7A01G528800.1	Wheat	plastid	74.29	76.47
HORVU7Hr1G116890.2	Barley	plastid	76.43	76.43
TraesCS7A01G528900.1	Wheat	plastid	73.57	74.1
TraesCS7A01G529400.1	Wheat	plastid	55.71	60.0
Os06t0716100-01	Rice	plastid	55.71	58.65
Zm00001d014790_P001	Maize	plastid	54.29	58.46
EER88964	Sorghum	plastid	54.29	55.47
KRH69778	Soybean	mitochondrion	32.86	45.1
TraesCS7A01G271600.1	Wheat	plastid	43.57	43.26
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	40.0	38.36
TraesCS4A01G069100.1	Wheat	plastid	42.86	36.14
TraesCS7A01G220300.1	Wheat	plastid	27.14	34.86
KRH28802	Soybean	plastid	37.14	32.91
KRH76655	Soybean	plastid	36.43	32.28
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	32.86	30.46
AT4G36040.1	Thale cress	plastid	35.0	30.43
CDX69193	Canola	plastid	35.0	30.25
KRH38394	Soybean	plastid	30.0	30.22
Bra011656.1-P	Field mustard	plastid	34.29	30.19
KRH08066	Soybean	plastid	33.57	29.94
CDX75547	Canola	plastid	33.57	29.38
Solyc02g062160.1.1	Tomato	plastid	32.14	29.22
Bra010502.1-P	Field mustard	plastid	32.86	28.57
Bra017744.1-P	Field mustard	plastid	32.86	28.57
CDY34072	Canola	plastid	32.86	28.57
CDY24828	Canola	plastid	32.86	28.57
PGSC0003DMT400061357	Potato	plastid	30.71	28.1
CDY26834	Canola	plastid	31.43	27.85
CDX72573	Canola	plastid	31.43	27.33
KRH08065	Soybean	plastid	32.14	27.27
KRG99625	Soybean	plastid	25.71	27.27
AT2G17880.1	Thale cress	plastid	30.71	26.88
CDY30342	Canola	plastid	29.29	26.62
Bra037247.1-P	Field mustard	plastid	29.29	26.62
KRH20682	Soybean	plastid	25.71	26.09
Bra040872.1-P	Field mustard	plastid	29.29	25.79
CDY07811	Canola	plastid	29.29	25.31
CDY29205	Canola	plastid	28.57	25.16
PGSC0003DMT400009189	Potato	plastid	24.29	23.78
KRH50148	Soybean	plastid	22.14	21.99
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	30.0	20.9
KRH69779	Soybean	mitochondrion	27.14	18.63

Protein Annotations

EnsemblPlants:TraesCS7A01G529200.1	EnsemblPlantsGene:TraesCS7A01G529200	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR44240	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625	SEG:seg
SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7A:+:709142035..709142457

Molecular Weight (calculated)

14841.6 Da

IEP (calculated)

10.385

GRAVY (calculated)

-0.185

Length

140 amino acids

Sequence
(BLAST)

001: MAAAFASTTA VLGSARPGRV AVARRCVVAR ASATMAAPAA LAAGRTHYDV LGVSAGASRS EIKAAYRRLA REVHPDVAGC GGDEGFIRLH AAYVTLADPD
101: ERARYDRDVT SRAAGMTMRQ ASATTGPAFR RRTWETDQCW

Best Arabidopsis Sequence Match ( AT4G36040.1 )
(BLAST)

001: MLSSSPTSFT HPFLSSSPPL SPISPPSRTA RISPPLVSAS CSYTYTEDSP RLHQIPRRLT TVPASLYDVL EVPLGATSQD IKSAYRRLAR ICHPDVAGTD
101: RTSSSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W

Arabidopsis Description

ATJ11At4g36040 [Source:UniProtKB/TrEMBL;Acc:Q1H544]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.