Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G516700.1 | Wheat | plastid | 93.57 | 93.57 |
| TraesCS7A01G529000.1 | Wheat | plastid | 88.57 | 89.21 |
| TraesCS7A01G528800.1 | Wheat | plastid | 86.43 | 88.97 |
| TraesCS7B01G445500.1 | Wheat | plastid | 87.86 | 88.49 |
| HORVU7Hr1G116890.2 | Barley | plastid | 87.86 | 87.86 |
| HORVU7Hr1G116960.1 | Barley | plastid | 80.71 | 83.09 |
| TraesCS7A01G529200.1 | Wheat | plastid | 82.14 | 82.14 |
| TraesCS7A01G528900.1 | Wheat | plastid | 81.43 | 82.01 |
| TraesCS7A01G529400.1 | Wheat | plastid | 60.0 | 64.62 |
| Os06t0716100-01 | Rice | plastid | 59.29 | 62.41 |
| Zm00001d014790_P001 | Maize | plastid | 57.14 | 61.54 |
| EER88964 | Sorghum | plastid | 57.14 | 58.39 |
| TraesCS7A01G271600.1 | Wheat | plastid | 45.0 | 44.68 |
| KRH69778 | Soybean | mitochondrion | 32.14 | 44.12 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 39.29 | 37.67 |
| TraesCS4A01G069100.1 | Wheat | plastid | 43.57 | 36.75 |
| TraesCS7A01G220300.1 | Wheat | plastid | 27.86 | 35.78 |
| VIT_03s0038g02110.t01 | Wine grape | cytosol, nucleus, plastid | 35.0 | 32.45 |
| KRH76655 | Soybean | plastid | 36.43 | 32.28 |
| Solyc02g062160.1.1 | Tomato | plastid | 35.0 | 31.82 |
| KRH28802 | Soybean | plastid | 35.71 | 31.65 |
| KRH08066 | Soybean | plastid | 33.57 | 29.94 |
| CDX69193 | Canola | plastid | 34.29 | 29.63 |
| Bra011656.1-P | Field mustard | plastid | 33.57 | 29.56 |
| KRH38394 | Soybean | plastid | 28.57 | 28.78 |
| PGSC0003DMT400061357 | Potato | plastid | 31.43 | 28.76 |
| CDX75547 | Canola | plastid | 32.86 | 28.75 |
| AT4G36040.1 | Thale cress | plastid | 32.86 | 28.57 |
| KRG99625 | Soybean | plastid | 26.43 | 28.03 |
| Bra010502.1-P | Field mustard | plastid | 32.14 | 27.95 |
| CDY34072 | Canola | plastid | 32.14 | 27.95 |
| CDX72573 | Canola | plastid | 32.14 | 27.95 |
| CDY24828 | Canola | plastid | 32.14 | 27.95 |
| Bra017744.1-P | Field mustard | plastid | 31.43 | 27.33 |
| CDY26834 | Canola | plastid | 30.71 | 27.22 |
| KRH08065 | Soybean | plastid | 31.43 | 26.67 |
| Bra040872.1-P | Field mustard | plastid | 30.0 | 26.42 |
| AT2G17880.1 | Thale cress | plastid | 30.0 | 26.25 |
| CDY30342 | Canola | plastid | 28.57 | 25.97 |
| Bra037247.1-P | Field mustard | plastid | 28.57 | 25.97 |
| CDY07811 | Canola | plastid | 30.0 | 25.93 |
| CDY29205 | Canola | plastid | 29.29 | 25.79 |
| KRH20682 | Soybean | plastid | 25.0 | 25.36 |
| PGSC0003DMT400009189 | Potato | plastid | 25.71 | 25.17 |
| KRH50148 | Soybean | plastid | 24.29 | 24.11 |
| VIT_04s0023g03470.t01 | Wine grape | cytosol, plastid | 30.71 | 21.39 |
| KRH69779 | Soybean | mitochondrion | 25.71 | 17.65 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G528700.1 | EnsemblPlantsGene:TraesCS7A01G528700 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44240 | PANTHER:PTHR44240:SF2 | PFAM:PF00226 | PFscan:PS50076 |
| PRINTS:PR00625 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:708913267..708919696
Molecular Weight (calculated)
14768.6 Da
IEP (calculated)
10.733
GRAVY (calculated)
-0.266
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFATSTAA VMGSARPGRV AGPRRCVVAR ASSTMAAPAA VAAGRTHYEV LGVGAGASRG EIKAAYRRLA REVHPDAAGG GGDEGFIRLH AAYATLADPN
101: ERARYDRDVA CRAAGMMMQR APAMSGPAFR RRTWETDQCW
101: ERARYDRDVA CRAAGMMMQR APAMSGPAFR RRTWETDQCW
001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
Arabidopsis Description
At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.