Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- cytosol 2
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G17880.1 | KRH04275 | AT4G17680.1 | 21798944 |
| AT2G17880.1 | KRH28216 | AT4G17680.1 | 21798944 |
| AT2G17880.1 | KRH57556 | AT4G17680.1 | 21798944 |
| AT2G17880.1 | KRH77271 | AT4G17680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20682 | Soybean | plastid | 50.76 | 48.55 |
| KRH38394 | Soybean | plastid | 50.0 | 47.48 |
| KRH69778 | Soybean | mitochondrion | 34.85 | 45.1 |
| KRH50148 | Soybean | plastid | 47.73 | 44.68 |
| KRH28802 | Soybean | plastid | 51.52 | 43.04 |
| KRH24255 | Soybean | cytosol | 32.58 | 42.57 |
| KRH29260 | Soybean | cytosol | 31.82 | 41.58 |
| KRH76655 | Soybean | plastid | 48.48 | 40.51 |
| VIT_03s0038g02110.t01 | Wine grape | cytosol, nucleus, plastid | 38.64 | 33.77 |
| PGSC0003DMT400009189 | Potato | plastid | 35.61 | 32.87 |
| AT2G17880.1 | Thale cress | plastid | 39.39 | 32.5 |
| Solyc02g062160.1.1 | Tomato | plastid | 37.88 | 32.47 |
| Bra040872.1-P | Field mustard | plastid | 38.64 | 32.08 |
| Zm00001d028404_P001 | Maize | plastid | 37.12 | 31.82 |
| CDY30342 | Canola | plastid | 37.12 | 31.82 |
| CDY29205 | Canola | plastid | 37.88 | 31.45 |
| Bra037247.1-P | Field mustard | plastid | 36.36 | 31.17 |
| GSMUA_Achr1P02450_001 | Banana | plastid | 34.85 | 31.08 |
| CDX72573 | Canola | plastid | 37.88 | 31.06 |
| Bra017744.1-P | Field mustard | plastid | 37.88 | 31.06 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 34.09 | 30.82 |
| CDY26834 | Canola | plastid | 36.36 | 30.38 |
| KRH08065 | Soybean | plastid | 37.88 | 30.3 |
| CDY07811 | Canola | plastid | 37.12 | 30.25 |
| GSMUA_Achr3P12640_001 | Banana | plastid | 30.3 | 30.08 |
| GSMUA_Achr1P18570_001 | Banana | mitochondrion | 31.82 | 30.0 |
| KRH08066 | Soybean | plastid | 35.61 | 29.94 |
| EER92566 | Sorghum | plastid | 35.61 | 29.56 |
| Bra011656.1-P | Field mustard | plastid | 35.61 | 29.56 |
| AT4G36040.1 | Thale cress | plastid | 35.61 | 29.19 |
| CDX69193 | Canola | plastid | 35.61 | 29.01 |
| CDX75547 | Canola | plastid | 34.85 | 28.75 |
| CDY24828 | Canola | plastid | 34.85 | 28.57 |
| Bra010502.1-P | Field mustard | plastid | 34.85 | 28.57 |
| EER88964 | Sorghum | plastid | 29.55 | 28.47 |
| PGSC0003DMT400061357 | Potato | plastid | 32.58 | 28.1 |
| CDY34072 | Canola | plastid | 34.09 | 27.95 |
| Os03t0244950-00 | Rice | mitochondrion, nucleus, plastid | 35.61 | 27.49 |
| TraesCS4D01G226900.1 | Wheat | plastid | 34.85 | 27.22 |
| TraesCS7B01G448500.1 | Wheat | plastid | 26.52 | 27.13 |
| VIT_04s0023g03470.t01 | Wine grape | cytosol, plastid | 40.91 | 26.87 |
| TraesCS7B01G445600.1 | Wheat | plastid | 28.03 | 26.81 |
| TraesCS7B01G445500.1 | Wheat | plastid | 28.03 | 26.62 |
| TraesCS7A01G528800.1 | Wheat | plastid | 27.27 | 26.47 |
| TraesCS7D01G517000.1 | Wheat | plastid | 28.03 | 26.43 |
| TraesCS7A01G528700.1 | Wheat | plastid | 28.03 | 26.43 |
| HORVU7Hr1G116890.2 | Barley | plastid | 28.03 | 26.43 |
| TraesCS7B01G446100.1 | Wheat | mitochondrion, plastid | 25.76 | 26.36 |
| Os06t0716100-01 | Rice | plastid | 26.52 | 26.32 |
| GSMUA_Achr5P18850_001 | Banana | plastid | 34.09 | 26.32 |
| TraesCS7A01G529400.1 | Wheat | plastid | 25.76 | 26.15 |
| Zm00001d014790_P001 | Maize | plastid | 25.76 | 26.15 |
| TraesCS4A01G069100.1 | Wheat | plastid | 32.58 | 25.9 |
| TraesCS7A01G529000.1 | Wheat | plastid | 27.27 | 25.9 |
| HORVU7Hr1G116960.1 | Barley | plastid | 26.52 | 25.74 |
| TraesCS7D01G516800.1 | Wheat | plastid | 27.27 | 25.71 |
| TraesCS7D01G516700.1 | Wheat | plastid | 27.27 | 25.71 |
| TraesCS7B01G445800.1 | Wheat | plastid | 27.27 | 25.71 |
| TraesCS7A01G529200.1 | Wheat | plastid | 27.27 | 25.71 |
| TraesCS4B01G226300.1 | Wheat | plastid | 31.82 | 25.61 |
| TraesCS7B01G446000.1 | Wheat | plastid | 25.0 | 25.58 |
| GSMUA_Achr8P19450_001 | Banana | plastid | 34.09 | 25.57 |
| TraesCS3D01G308300.1 | Wheat | plastid | 26.52 | 25.55 |
| KRH14184 | Soybean | mitochondrion, plastid | 27.27 | 25.35 |
| TraesCS7A01G528900.1 | Wheat | plastid | 26.52 | 25.18 |
| TraesCS7B01G445700.1 | Wheat | plastid | 26.52 | 25.18 |
| TraesCS7D01G516900.1 | Wheat | plastid | 26.52 | 25.18 |
| TraesCS7D01G516600.1 | Wheat | plastid | 26.52 | 25.18 |
| KXG25435 | Sorghum | plastid | 28.03 | 24.83 |
| GSMUA_Achr5P11400_001 | Banana | plastid | 28.79 | 24.68 |
| Zm00001d032030_P001 | Maize | plastid | 25.76 | 24.64 |
| Zm00001d053213_P001 | Maize | mitochondrion, plastid | 25.76 | 24.29 |
| HORVU4Hr1G063590.1 | Barley | plastid | 31.82 | 24.28 |
| TraesCS7B01G170400.1 | Wheat | plastid | 25.76 | 24.11 |
| Os08t0548400-00 | Rice | plastid | 26.52 | 23.97 |
| TraesCS7D01G271900.1 | Wheat | plastid | 24.24 | 22.7 |
| TraesCS7A01G271600.1 | Wheat | plastid | 24.24 | 22.7 |
| KRH69779 | Soybean | mitochondrion | 34.09 | 22.06 |
| HORVU7Hr1G057330.1 | Barley | plastid | 23.48 | 21.99 |
| KRH46491 | Soybean | plastid | 24.24 | 20.51 |
| TraesCS4B01G226200.1 | Wheat | plastid | 27.27 | 20.11 |
| KRG98415 | Soybean | plastid | 22.73 | 19.87 |
| TraesCS7B01G445900.1 | Wheat | mitochondrion, plastid | 21.97 | 18.95 |
Protein Annotations
| EMBL:ACUP02011225 | EnsemblPlants:KRG99625 | EnsemblPlantsGene:GLYMA_18G158500 | EntrezGene:100795089 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44240 | PANTHER:PTHR44240:SF3 | PFAM:PF00226 |
| PFscan:PS50076 | PRINTS:PR00625 | ProteinID:KRG99625 | ProteinID:KRG99625.1 | SMART:SM00271 | SUPFAM:SSF46565 |
| UniParc:UPI000233F252 | UniProt:K7MSK1 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:35328857..35329255
Molecular Weight (calculated)
14781.5 Da
IEP (calculated)
7.079
GRAVY (calculated)
-0.097
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MISSVSFLSL PFVNFFDNAM ASSSCCVKSW PIVAFATAEA RSSWMEQPRP SYLNSSCSSP YDILGIPVGA SNQEIKAAYR RLARVCQTDV AAIDRKNLSA
101: DEFMKIHAAY STLSDPNMCA NYDWSLFWRQ QQ
101: DEFMKIHAAY STLSDPNMCA NYDWSLFWRQ QQ
001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
Arabidopsis Description
At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.