CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24255	Soybean	cytosol	94.06	94.06
KRH69778	Soybean	mitochondrion	55.45	54.9
KRH08066	Soybean	plastid	55.45	35.67
KRH28802	Soybean	plastid	55.45	35.44
KRH76655	Soybean	plastid	54.46	34.81
KRH08065	Soybean	plastid	54.46	33.33
KRH14184	Soybean	mitochondrion, plastid	45.54	32.39
KRH38394	Soybean	plastid	44.55	32.37
KRG99625	Soybean	plastid	41.58	31.82
KRH50148	Soybean	plastid	42.57	30.5
KRG98415	Soybean	plastid	43.56	29.14
KRH20682	Soybean	plastid	39.6	28.99
KRH46491	Soybean	plastid	41.58	26.92
KRH69779	Soybean	mitochondrion	45.54	22.55

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100305807	MapMan:35.1	EMBL:ACUP02006796	EMBL:BT089594	UniProt:C6SWQ1
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_11G105800	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
EnsemblPlants:KRH29260	ProteinID:KRH29260	ProteinID:KRH29260.1	PFAM:PF00226	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PANTHER:PTHR44240	PANTHER:PTHR44240:SF3	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0001B15004

Description

hypothetical protein

Coordinates

chr11:+:8038613..8039501

Molecular Weight (calculated)

11687.7 Da

IEP (calculated)

9.037

GRAVY (calculated)

-0.659

Length

101 amino acids

Sequence
(BLAST)

001: MASLYDVLGI SVGASCIEIK AAYRKLARTY HPDVVAMNQK ESSANQFMMI HSAYSTLSDP EKRAQYDREI YRYRRSANME ARNQTFSYAG SARKWETDQC
101: W

Best Arabidopsis Sequence Match ( AT3G13310.1 )
(BLAST)

001: MAGTLVNSAG RFSPGNCILP QQRTARFYSG TARFPTGAPS FKASAQTLNA EPAVTESVRR RVSSLYELLK VNETASLTEI KTAYRSLAKV YHPDASESDG
101: RDFMEIHKAY ATLADPTTRA IYDSTLRVPR RRVHAGAMGR SGRVYATTRR WETDQCW

Arabidopsis Description

At3g13310 [Source:UniProtKB/TrEMBL;Acc:Q9LTT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.