Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G446100.1 | Wheat | mitochondrion, plastid | 83.72 | 83.72 |
| TraesCS7D01G516600.1 | Wheat | plastid | 79.84 | 74.1 |
| HORVU7Hr1G116960.1 | Barley | plastid | 77.52 | 73.53 |
| TraesCS7B01G445500.1 | Wheat | plastid | 75.97 | 70.5 |
| TraesCS7B01G445600.1 | Wheat | plastid | 75.19 | 70.29 |
| HORVU7Hr1G116890.2 | Barley | plastid | 75.97 | 70.0 |
| TraesCS7B01G445800.1 | Wheat | plastid | 75.97 | 70.0 |
| TraesCS7B01G445700.1 | Wheat | plastid | 74.42 | 69.06 |
| TraesCS7B01G448500.1 | Wheat | plastid | 68.22 | 68.22 |
| Zm00001d014790_P001 | Maize | plastid | 58.14 | 57.69 |
| Os06t0716100-01 | Rice | plastid | 58.14 | 56.39 |
| EER88964 | Sorghum | plastid | 52.71 | 49.63 |
| KRH69778 | Soybean | mitochondrion | 33.33 | 42.16 |
| TraesCS7B01G170400.1 | Wheat | plastid | 45.74 | 41.84 |
| TraesCS7B01G445900.1 | Wheat | mitochondrion, plastid | 45.74 | 38.56 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 42.64 | 37.67 |
| TraesCS7B01G127100.1 | Wheat | cytosol, mitochondrion | 27.13 | 35.35 |
| TraesCS4B01G226300.1 | Wheat | plastid | 41.86 | 32.93 |
| KRH76655 | Soybean | plastid | 38.76 | 31.65 |
| KRH28802 | Soybean | plastid | 37.98 | 31.01 |
| VIT_03s0038g02110.t01 | Wine grape | cytosol, nucleus, plastid | 34.88 | 29.8 |
| KRH38394 | Soybean | plastid | 30.23 | 28.06 |
| Bra017744.1-P | Field mustard | plastid | 34.11 | 27.33 |
| Solyc02g062160.1.1 | Tomato | plastid | 32.56 | 27.27 |
| KRH08066 | Soybean | plastid | 32.56 | 26.75 |
| TraesCS4B01G226200.1 | Wheat | plastid | 36.43 | 26.26 |
| PGSC0003DMT400061357 | Potato | plastid | 31.01 | 26.14 |
| Bra011656.1-P | Field mustard | plastid | 31.78 | 25.79 |
| AT4G36040.1 | Thale cress | plastid | 31.78 | 25.47 |
| CDX69193 | Canola | plastid | 31.78 | 25.31 |
| KRG99625 | Soybean | plastid | 25.58 | 25.0 |
| CDX75547 | Canola | plastid | 31.01 | 25.0 |
| KRH08065 | Soybean | plastid | 31.78 | 24.85 |
| CDX72573 | Canola | plastid | 31.01 | 24.84 |
| CDY24828 | Canola | plastid | 30.23 | 24.22 |
| CDY34072 | Canola | plastid | 30.23 | 24.22 |
| Bra010502.1-P | Field mustard | plastid | 30.23 | 24.22 |
| CDY26834 | Canola | plastid | 29.46 | 24.05 |
| CDY30342 | Canola | plastid | 28.68 | 24.03 |
| AT2G17880.1 | Thale cress | plastid | 29.46 | 23.75 |
| CDY07811 | Canola | plastid | 29.46 | 23.46 |
| Bra037247.1-P | Field mustard | plastid | 27.91 | 23.38 |
| CDY29205 | Canola | plastid | 28.68 | 23.27 |
| KRH20682 | Soybean | plastid | 24.81 | 23.19 |
| Bra040872.1-P | Field mustard | plastid | 27.13 | 22.01 |
| KRH50148 | Soybean | plastid | 23.26 | 21.28 |
| PGSC0003DMT400009189 | Potato | plastid | 23.26 | 20.98 |
| VIT_04s0023g03470.t01 | Wine grape | cytosol, plastid | 32.56 | 20.9 |
| KRH69779 | Soybean | mitochondrion | 27.13 | 17.16 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G446000.1 | EnsemblPlantsGene:TraesCS7B01G446000 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR44240 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
| ScanProsite:PS00636 | SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 |
Description
No Description!
Coordinates
chr7B:+:709468338..709469074
Molecular Weight (calculated)
13743.4 Da
IEP (calculated)
10.739
GRAVY (calculated)
-0.209
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFAAAAVA LPGRVAGSRR CVVARASATM PVAGRTHYEV LGVGARASRG EIKAAYRHLA REVHPDGTGG GGNEGFIRLH AAYATLADPD ERACYDRNVA
101: GRAAAMMMRR AGAAVPAFRR RTWETDQCW
101: GRAAAMMMRR AGAAVPAFRR RTWETDQCW
001: MLSSSPTSFT HPFLSSSPPL SPISPPSRTA RISPPLVSAS CSYTYTEDSP RLHQIPRRLT TVPASLYDVL EVPLGATSQD IKSAYRRLAR ICHPDVAGTD
101: RTSSSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W
101: RTSSSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W
Arabidopsis Description
ATJ11At4g36040 [Source:UniProtKB/TrEMBL;Acc:Q1H544]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.