Factsheet for TraesCS7B01G448500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G215300.1
TraesCS1B01G228800.1
TraesCS1D01G217800.1
TraesCS6A01G262200.1
TraesCS6B01G289500.1
TraesCS6D01G243000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17880.1	TraesCS1A01G215300.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1B01G228800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS1D01G217800.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6A01G262200.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6B01G289500.1	AT4G17680.1	21798944
AT2G17880.1	TraesCS6D01G243000.1	AT4G17680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G446100.1	Wheat	mitochondrion, plastid	69.77	69.77
TraesCS7B01G446000.1	Wheat	plastid	68.22	68.22
HORVU7Hr1G116960.1	Barley	plastid	68.99	65.44
TraesCS7D01G516600.1	Wheat	plastid	68.22	63.31
TraesCS7B01G445800.1	Wheat	plastid	68.22	62.86
TraesCS7B01G445500.1	Wheat	plastid	65.89	61.15
TraesCS7B01G445600.1	Wheat	plastid	65.12	60.87
HORVU7Hr1G116890.2	Barley	plastid	65.89	60.71
TraesCS7B01G445700.1	Wheat	plastid	64.34	59.71
Os06t0716100-01	Rice	plastid	57.36	55.64
Zm00001d014790_P001	Maize	plastid	55.81	55.38
EER88964	Sorghum	plastid	54.26	51.09
TraesCS7B01G170400.1	Wheat	plastid	46.51	42.55
KRH69778	Soybean	mitochondrion	32.56	41.18
TraesCS7B01G445900.1	Wheat	mitochondrion, plastid	44.19	37.25
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	41.09	36.3
TraesCS7B01G127100.1	Wheat	cytosol, mitochondrion	26.36	34.34
TraesCS4B01G226300.1	Wheat	plastid	43.41	34.15
VIT_03s0038g02110.t01	Wine grape	cytosol, nucleus, plastid	36.43	31.13
KRH76655	Soybean	plastid	37.98	31.01
KRH28802	Soybean	plastid	37.21	30.38
PGSC0003DMT400061357	Potato	plastid	34.11	28.76
KRH08066	Soybean	plastid	34.11	28.03
AT4G36040.1	Thale cress	plastid	34.88	27.95
Bra011656.1-P	Field mustard	plastid	34.11	27.67
CDX75547	Canola	plastid	34.11	27.5
TraesCS4B01G226200.1	Wheat	plastid	37.98	27.37
Solyc02g062160.1.1	Tomato	plastid	32.56	27.27
CDY26834	Canola	plastid	33.33	27.22
Bra017744.1-P	Field mustard	plastid	33.33	26.71
Bra037247.1-P	Field mustard	plastid	31.78	26.62
CDY30342	Canola	plastid	31.78	26.62
KRH38394	Soybean	plastid	28.68	26.62
CDX69193	Canola	plastid	33.33	26.54
KRG99625	Soybean	plastid	27.13	26.52
CDY34072	Canola	plastid	32.56	26.09
CDX72573	Canola	plastid	32.56	26.09
KRH08065	Soybean	plastid	32.56	25.45
AT2G17880.1	Thale cress	plastid	31.01	25.0
CDY24828	Canola	plastid	31.01	24.84
Bra010502.1-P	Field mustard	plastid	31.01	24.84
CDY07811	Canola	plastid	31.01	24.69
CDY29205	Canola	plastid	30.23	24.53
Bra040872.1-P	Field mustard	plastid	29.46	23.9
PGSC0003DMT400009189	Potato	plastid	24.81	22.38
KRH50148	Soybean	plastid	24.03	21.99
KRH20682	Soybean	plastid	23.26	21.74
VIT_04s0023g03470.t01	Wine grape	cytosol, plastid	31.78	20.4
KRH69779	Soybean	mitochondrion	31.01	19.61

Protein Annotations

EnsemblPlants:TraesCS7B01G448500.1	EnsemblPlantsGene:TraesCS7B01G448500	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44240	PANTHER:PTHR44240:SF2	PFAM:PF00226	PFscan:PS50076
PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:711214880..711215269

Molecular Weight (calculated)

13900.4 Da

IEP (calculated)

10.046

GRAVY (calculated)

-0.340

Length

129 amino acids

Sequence
(BLAST)

001: MATFAVATVS LPGRVAGTRR CVVARASATM AVAGRTHYEV LGLGAGASRE EIKAAYRRLA RDVHPDTAGG GGDEDFIRLH AAYATLADLD ERARYDRDVA
101: GRAAGTMMRR AGSTGPAFRR RTWETDQCW

Best Arabidopsis Sequence Match ( AT2G17880.1 )
(BLAST)

001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW

Arabidopsis Description

At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.