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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:mitochondrion
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d017649_P001
Zm00001d029988_P001
Zm00001d047069_P001
Zm00001d051484_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G17880.1 Zm00001d017649_P001 AT4G17680.1 21798944
AT2G17880.1 Zm00001d029988_P001 AT4G17680.1 21798944
AT2G17880.1 Zm00001d047069_P001 AT4G17680.1 21798944
AT2G17880.1 Zm00001d051484_P001 AT4G17680.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER88964 Sorghum plastid 70.0 66.42
TraesCS7B01G446100.1 Wheat mitochondrion, plastid 61.54 62.02
Os06t0716100-01 Rice plastid 60.77 59.4
TraesCS7B01G445600.1 Wheat plastid 62.31 58.7
TraesCS7B01G446000.1 Wheat plastid 57.69 58.14
TraesCS7D01G516600.1 Wheat plastid 61.54 57.55
TraesCS7A01G528700.1 Wheat plastid 61.54 57.14
TraesCS7D01G516900.1 Wheat plastid 60.77 56.83
TraesCS7A01G529000.1 Wheat plastid 60.77 56.83
TraesCS7D01G516700.1 Wheat plastid 60.77 56.43
HORVU7Hr1G116890.2 Barley plastid 60.77 56.43
TraesCS7A01G529400.1 Wheat plastid 56.15 56.15
HORVU7Hr1G116960.1 Barley plastid 58.46 55.88
TraesCS7B01G448500.1 Wheat plastid 55.38 55.81
TraesCS7B01G445700.1 Wheat plastid 59.23 55.4
TraesCS7A01G528800.1 Wheat plastid 57.69 55.15
TraesCS7B01G445800.1 Wheat plastid 59.23 55.0
TraesCS3D01G308300.1 Wheat plastid 57.69 54.74
TraesCS7B01G445500.1 Wheat plastid 58.46 54.68
TraesCS7A01G528900.1 Wheat plastid 58.46 54.68
TraesCS7A01G529200.1 Wheat plastid 58.46 54.29
TraesCS7D01G516800.1 Wheat plastid 57.69 53.57
TraesCS7D01G517000.1 Wheat plastid 56.15 52.14
KRH69778 Soybean mitochondrion 34.62 44.12
Zm00001d053213_P001 Maize mitochondrion, plastid 43.08 40.0
GSMUA_AchrUn_... Banana mitochondrion, plastid 44.62 39.73
TraesCS7B01G445900.1 Wheat mitochondrion, plastid 46.15 39.22
Zm00001d032030_P001 Maize plastid 41.54 39.13
Zm00001d028404_P001 Maize plastid 44.62 37.66
KRH76655 Soybean plastid 39.23 32.28
VIT_03s0038g02110.t01 Wine grape cytosol, nucleus, plastid 36.92 31.79
KRH28802 Soybean plastid 38.46 31.65
CDY30342 Canola plastid 36.15 30.52
CDY24828 Canola plastid 37.69 30.43
Bra010502.1-P Field mustard plastid 37.69 30.43
CDY34072 Canola plastid 37.69 30.43
CDY26834 Canola plastid 36.92 30.38
Bra037247.1-P Field mustard plastid 34.62 29.22
CDX75547 Canola plastid 35.38 28.75
KRH08066 Soybean plastid 34.62 28.66
Solyc02g062160.1.1 Tomato plastid 33.85 28.57
CDX69193 Canola plastid 35.38 28.4
Bra011656.1-P Field mustard plastid 34.62 28.3
AT2G17880.1 Thale cress plastid 34.62 28.12
PGSC0003DMT400061357 Potato plastid 33.08 28.1
KRH38394 Soybean plastid 30.0 28.06
Bra017744.1-P Field mustard plastid 34.62 27.95
CDX72573 Canola plastid 34.62 27.95
AT4G36040.1 Thale cress plastid 33.85 27.33
Bra040872.1-P Field mustard plastid 33.08 27.04
CDY07811 Canola plastid 33.08 26.54
CDY29205 Canola plastid 32.31 26.42
KRG99625 Soybean plastid 26.15 25.76
KRH50148 Soybean plastid 27.69 25.53
KRH08065 Soybean plastid 31.54 24.85
KRH20682 Soybean plastid 26.15 24.64
PGSC0003DMT400009189 Potato plastid 26.15 23.78
VIT_04s0023g03470.t01 Wine grape cytosol, plastid 33.08 21.39
KRH69779 Soybean mitochondrion 28.46 18.14
Protein Annotations
EnsemblPlants:Zm00001d014790_P001EnsemblPlants:Zm00001d014790_T001EnsemblPlantsGene:Zm00001d014790Gene3D:1.10.287.110InterPro:DnaJ_domainInterPro:DnaJ_domain_CS
InterPro:IPR001623InterPro:IPR036869InterPro:J_dom_sfPANTHER:PTHR44240PANTHER:PTHR44240:SF2PFAM:PF00226
PFscan:PS50076PRINTS:PR00625ProteinID:AQK67193.1ScanProsite:PS00636SEG:segSMART:SM00271
SUPFAM:SSF46565UniParc:UPI0002207ED5UniProt:A0A1D6GWD7MapMan:35.2::
Description
Chaperone protein dnaJ 11
Coordinates
chr5:+:63344714..63345106
Molecular Weight (calculated)
13813.3 Da
IEP (calculated)
10.725
GRAVY (calculated)
-0.450
Length
130 amino acids
Sequence
(BLAST)
001: MAPSLASTAG LPSCGARRGG RCVARRASAV ATPATATART HYEVLGVGAG ASRCEIKAAY RRLAREVHPD CGGRGDEGFI RLHAAYATLA DPDERARYDR
101: AAAVRSRIRA APSGSGAGFR PRRWETDQCW
Best Arabidopsis Sequence Match ( AT2G17880.1 )
(BLAST)
001: MLSSSPTFFA TPFLSSSSSS SPSFSSTSPP SRISRISPSL STTTASYTCA EDLPRLRQIP QRFSATASLY EILEIPVGST SQEIKSAYRR LARICHPDVA
101: RNSRDNSSAD DFMKIHAAYC TLSDPEKRAV YDRRTLLRSR PLTAGYGSYG GRNWETDQCW
Arabidopsis Description
At2g17880 [Source:UniProtKB/TrEMBL;Acc:O48828]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.