Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G407800.1 | Wheat | nucleus | 94.53 | 94.53 |
| TraesCS2A01G391200.1 | Wheat | nucleus | 93.53 | 93.53 |
| TraesCS2D01G387500.1 | Wheat | cytosol, nucleus, plastid | 93.53 | 93.07 |
| Os04t0542000-01 | Rice | cytosol, nucleus, plastid | 71.14 | 68.42 |
| Zm00001d002798_P001 | Maize | mitochondrion | 70.65 | 67.94 |
| EES11200 | Sorghum | mitochondrion | 69.15 | 64.35 |
| Zm00001d025967_P001 | Maize | nucleus | 65.17 | 62.09 |
| GSMUA_Achr11P... | Banana | cytosol | 23.38 | 42.34 |
| HORVU0Hr1G038250.1 | Barley | cytosol | 31.84 | 40.76 |
| HORVU4Hr1G089030.1 | Barley | cytosol | 39.3 | 40.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 12.94 | 37.68 |
| HORVU1Hr1G041890.1 | Barley | mitochondrion | 29.85 | 33.52 |
| HORVU3Hr1G083800.1 | Barley | nucleus | 35.82 | 33.49 |
| HORVU2Hr1G064730.1 | Barley | cytosol | 26.87 | 30.68 |
| GSMUA_Achr10P... | Banana | nucleus | 30.85 | 30.24 |
| HORVU0Hr1G005210.2 | Barley | cytosol, plastid | 25.37 | 28.81 |
| HORVU0Hr1G016350.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 23.38 | 26.4 |
| HORVU2Hr1G046550.2 | Barley | plastid | 22.89 | 22.22 |
Protein Annotations
| EMBL:AK373313 | EnsemblPlants:HORVU2Hr1G092750.1 | EnsemblPlantsGene:HORVU2Hr1G092750 | InterPro:Senescence_reg_S40 | ncoils:Coil | PANTHER:PTHR33083 |
| PANTHER:PTHR33083:SF8 | PFAM:PF04520 | SEG:seg | UniParc:UPI000200837F | UniProt:F2EAY8 | MapMan:35.2 |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EAY8]
Coordinates
chrchr2H:+:655136809..655138805
Molecular Weight (calculated)
21539.9 Da
IEP (calculated)
5.663
GRAVY (calculated)
-0.614
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMRDRHASA VSPSLRFLGF IKQPDGAGAA DMELELDERD VVWSSSTSFS SASTASSPSP TPSPSGGGHR WPLSSRAFPT GSAGLSALIA DEDSHSPSAA
101: IPAAARREKQ PLSQPYHQSA PVAVPAWSKA TADRRRREAE QEAADEEDED DDELMVPPHE MAARRAAAAA SVMEGAGRTL KGRDLRRMRN AVWRTTGFLD
201: L
101: IPAAARREKQ PLSQPYHQSA PVAVPAWSKA TADRRRREAE QEAADEEDED DDELMVPPHE MAARRAAAAA SVMEGAGRTL KGRDLRRMRN AVWRTTGFLD
201: L
001: MATSKCYYPR PSHRFFTTDQ HVTATSDFEL DEWDLFNTGS DSSSSFSFSD LTITSGRTGT NRQIHGGSDS GKAASSLPVN VPDWSKILGD ESRRQRKISN
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
101: EEEVDGDEIL CGEGTRRVPP HELLANRRMA SFSVHEGAGR TLKGRDLSRV RNTIFKIRGI ED
Arabidopsis Description
Uncharacterized protein At2g28400 [Source:UniProtKB/TrEMBL;Acc:Q9SKN0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.