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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93797 Canola cytosol 97.93 97.93
CDY70936 Canola cytosol 29.61 78.14
CDX84046 Canola cytosol 95.24 75.16
CDY44966 Canola cytosol 94.82 73.87
GSMUA_Achr9P19890_001 Banana cytosol 65.22 70.0
AT1G33170.1 Thale cress cytosol 91.93 69.48
CDY25257 Canola cytosol 83.64 65.16
GSMUA_Achr4P24710_001 Banana cytosol 68.74 64.97
CDX94256 Canola cytosol 83.02 64.78
CDX99539 Canola cytosol 83.44 64.48
CDX99540 Canola cytosol 70.39 63.31
CDY01971 Canola endoplasmic reticulum, extracellular 52.59 61.06
GSMUA_Achr4P29040_001 Banana cytosol, golgi, mitochondrion, peroxisome 74.12 58.98
KRH60099 Soybean cytosol 75.36 58.43
PGSC0003DMT400014851 Potato cytosol 75.36 58.33
KRH41379 Soybean cytosol 75.78 58.19
CDY50730 Canola cytosol 59.42 57.86
CDY70748 Canola cytosol, peroxisome 50.93 57.21
VIT_02s0025g03200.t01 Wine grape cytosol 74.74 57.12
Solyc08g013740.2.1 Tomato unclear 74.12 56.74
GSMUA_Achr1P11480_001 Banana cytosol 71.22 55.84
Os10t0510400-01 Rice golgi, plasma membrane 73.08 55.68
Os06t0103900-01 Rice cytosol, golgi, mitochondrion, plastid 72.46 55.47
TraesCS7D01G027500.1 Wheat endoplasmic reticulum, golgi 71.43 54.85
TraesCS4A01G458400.1 Wheat endoplasmic reticulum, golgi 71.22 54.69
EER89033 Sorghum cytosol 70.19 54.68
TraesCS7A01G031100.1 Wheat endoplasmic reticulum, golgi 71.01 54.53
TraesCS6D01G025000.1 Wheat cytosol 71.22 54.52
GSMUA_Achr1P04180_001 Banana cytosol 68.12 54.38
TraesCS6A01G021300.1 Wheat cytosol 70.81 54.2
EER93951 Sorghum peroxisome 71.43 54.16
TraesCS6B01G029000.1 Wheat cytosol 70.6 54.04
Zm00001d035876_P002 Maize cytosol 68.53 53.39
CDY57187 Canola cytosol 32.51 50.32
CDX83493 Canola golgi 43.06 50.24
CDY18904 Canola endoplasmic reticulum 65.42 49.92
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 65.01 49.68
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 64.39 49.52
HORVU7Hr1G003860.2 Barley plasma membrane 71.22 48.59
CDY54063 Canola mitochondrion 55.49 48.38
CDY46435 Canola endoplasmic reticulum, golgi 59.83 47.93
CDY45006 Canola endoplasmic reticulum, golgi 59.42 47.44
CDY40268 Canola endoplasmic reticulum, golgi 59.42 47.36
CDY16198 Canola endoplasmic reticulum, golgi 59.21 47.19
HORVU6Hr1G003900.3 Barley cytosol 71.64 46.57
Zm00001d032476_P001 Maize cytosol, endoplasmic reticulum, mitochondrion, peroxisome 46.38 46.28
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 58.39 45.48
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 58.18 45.18
CDY43336 Canola cytosol 16.77 42.19
CDY10370 Canola cytosol 21.95 38.55
CDY12278 Canola endoplasmic reticulum, golgi 47.41 38.17
CDY68187 Canola mitochondrion 48.65 38.09
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 57.14 38.07
CDY22567 Canola endoplasmic reticulum, golgi 47.2 38.0
CDX76494 Canola endoplasmic reticulum, golgi 45.96 37.88
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 46.17 37.73
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 46.79 37.48
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 46.79 37.48
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 46.79 37.48
CDX74348 Canola plastid 45.13 36.52
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 45.13 36.52
CDY07198 Canola mitochondrion 45.13 36.39
CDY51142 Canola cytosol 46.17 36.14
CDX70565 Canola endoplasmic reticulum 43.48 34.54
CDX78577 Canola endoplasmic reticulum, golgi 43.48 34.54
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 46.58 34.25
CDX98606 Canola vacuole 46.38 33.73
CDX92981 Canola endoplasmic reticulum, golgi 41.82 33.33
CDX94861 Canola endoplasmic reticulum, golgi 41.61 33.33
CDY61681 Canola endoplasmic reticulum, golgi 46.38 32.84
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 41.41 32.63
CDX86634 Canola endoplasmic reticulum, golgi 41.82 32.58
CDX89824 Canola endoplasmic reticulum, golgi 41.82 32.58
CDY15505 Canola endoplasmic reticulum, golgi 41.82 32.58
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 40.99 32.41
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 41.41 32.26
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 38.72 32.02
CDX78919 Canola cytosol, golgi 46.38 31.68
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 39.34 31.41
CDY24949 Canola endoplasmic reticulum, plasma membrane 43.27 30.92
CDY27362 Canola plasma membrane 64.39 30.82
CDY07639 Canola endoplasmic reticulum 43.06 30.72
CDY08621 Canola mitochondrion, plastid 36.65 30.31
CDY00911 Canola mitochondrion 36.65 30.26
CDX70263 Canola plastid 37.06 30.24
CDX98897 Canola golgi, mitochondrion 43.27 30.16
CDX74837 Canola mitochondrion 42.86 30.04
CDX87530 Canola cytosol, golgi, peroxisome, plastid 40.17 29.89
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 39.96 29.78
CDY20475 Canola endoplasmic reticulum, golgi 42.24 29.61
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 39.75 29.09
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 40.99 28.82
CDY33299 Canola nucleus 35.82 28.64
CDY24913 Canola mitochondrion 39.13 28.12
CDX84330 Canola endoplasmic reticulum, plasma membrane 41.2 27.91
CDY44314 Canola endoplasmic reticulum 41.61 27.02
CDX94669 Canola endoplasmic reticulum 41.41 26.7
CDX99828 Canola golgi 40.79 26.27
CDY66535 Canola nucleus 35.4 26.11
CDY48339 Canola cytosol 40.79 26.06
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 40.99 25.98
CDY31339 Canola plasma membrane 40.37 25.52
CDY39830 Canola plasma membrane 40.17 25.13
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 40.17 24.28
CDY26666 Canola mitochondrion 34.58 23.29
CDY67390 Canola mitochondrion 34.58 23.19
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 39.96 22.98
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 35.82 22.56
CDX70102 Canola cytosol 43.69 22.42
CDY66721 Canola golgi 24.43 22.31
CDY72237 Canola nucleus 8.49 10.22
CDY33300 Canola plastid 0.0 0.0
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078DA70EnsemblPlants:CDX85977ProteinID:CDX85977
ProteinID:CDX85977.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00143844001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1052InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335UniParc:UPI0004EEB2B3SEG:seg::
Description
BnaC06g21570D
Coordinates
chrLK031843:-:1278402..1280540
Molecular Weight (calculated)
55171.2 Da
IEP (calculated)
7.442
GRAVY (calculated)
-0.348
Length
483 amino acids
Sequence
(BLAST)
001: MPPNYKIPFK WPQSRDYAWY DNIPHKELSI EKAIQNWIQV EGERFRFPGG GTGFPRGADA YIDDISRLIP LTDGAIRTAI DTGCGVASFG AYLLKRDIVA
101: MSFAPRDTHE AQVQFALERG VPAVIGIMGS IRLPYPARAF DLAHCSRCLI PWFQNDGLYL TEVDRVLRPG GYWILSGPPI NWKKHWKGWE RTQEDLKQEQ
201: DSIENAARSL CWKKVTEKGD FSIWQKPINH IACKKLKRAH KSPPICTKAV QPDFAWYKEL ESCVTPLPEA NSPDEFAGGA LEDWPDRAFA VPPRIIQGTI
301: PEINAEKFKE DNEVWKERIA YYKQILPELS RGRFRNIMDM NAYLGGFAAA IVKYPSWVMN VVPVDAEKQT LGAIYERGFI GTYQDWCEAF STYPRTYDLI
401: HAGGLFSMYE NRCDVTLILL EMDRILRPEG TVVFRDTVEM LTKIQSITNG MKWTSRIMDH EKGPFIPEKI LLAVKSYWTG PSA
Best Arabidopsis Sequence Match ( AT1G26850.2 )
(BLAST)
001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH
Arabidopsis Description
Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.