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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 82.55 95.26
CDX76494 Canola endoplasmic reticulum, golgi 81.08 94.37
AT4G19120.2 Thale cress cytosol, endoplasmic reticulum, golgi 81.52 92.67
CDX78919 Canola cytosol, golgi 94.87 91.51
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 81.38 84.47
CDX98606 Canola vacuole 81.67 83.89
Solyc08g075870.2.1 Tomato nucleus, unclear 67.89 77.55
PGSC0003DMT400079286 Potato cytosol 67.45 77.05
VIT_02s0033g01120.t01 Wine grape cytosol 67.45 76.67
PGSC0003DMT400047515 Potato cytosol, golgi, plasma membrane 66.86 76.38
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 64.37 76.08
Solyc08g005490.2.1 Tomato nucleus, unclear 66.42 75.88
GSMUA_Achr4P27550_001 Banana extracellular, plasma membrane 63.05 74.52
CDY12278 Canola endoplasmic reticulum, golgi 64.22 73.0
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 64.22 72.64
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 64.22 72.64
CDY22567 Canola endoplasmic reticulum, golgi 63.78 72.5
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 63.93 72.31
Os04t0218400-00 Rice cytosol 15.1 70.55
GSMUA_Achr4P18470_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 61.58 70.23
EER94413 Sorghum plasma membrane 59.82 66.56
TraesCS1D01G202300.2 Wheat endoplasmic reticulum 58.5 65.62
HORVU1Hr1G051470.3 Barley endoplasmic reticulum 58.5 65.3
TraesCS1A01G198600.1 Wheat golgi 58.5 63.53
TraesCS1B01G213600.1 Wheat endoplasmic reticulum 58.5 62.64
GSMUA_Achr5P18010_001 Banana nucleus 64.22 58.56
CDX85977 Canola cytosol 32.84 46.38
CDX93797 Canola cytosol 32.7 46.17
CDY50730 Canola cytosol 32.4 44.56
CDY10370 Canola cytosol 17.89 44.36
CDY01971 Canola endoplasmic reticulum, extracellular 26.98 44.23
CDY70936 Canola cytosol 11.73 43.72
CDY70748 Canola cytosol, peroxisome 27.27 43.26
CDX83493 Canola golgi 26.25 43.24
CDX99540 Canola cytosol 33.72 42.83
CDY43336 Canola cytosol 11.88 42.19
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 38.42 41.72
CDX99539 Canola cytosol 37.54 40.96
CDY18904 Canola endoplasmic reticulum 37.83 40.76
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 37.68 40.66
CDX84046 Canola cytosol 36.36 40.52
CDY54063 Canola mitochondrion 32.84 40.43
CDX94256 Canola cytosol 36.22 39.9
CDY25257 Canola cytosol 36.07 39.68
CDY44966 Canola cytosol 36.07 39.68
CDY45006 Canola endoplasmic reticulum, golgi 34.75 39.17
CDY46435 Canola endoplasmic reticulum, golgi 34.6 39.14
CDY16198 Canola endoplasmic reticulum, golgi 34.75 39.11
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 35.63 39.07
CDY40268 Canola endoplasmic reticulum, golgi 34.6 38.94
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 35.34 38.87
CDY57187 Canola cytosol 17.74 38.78
CDX74348 Canola plastid 33.58 38.36
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 33.43 38.19
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 32.7 38.18
CDY07198 Canola mitochondrion 33.43 38.06
CDY51142 Canola cytosol 33.72 37.28
CDY68187 Canola mitochondrion 33.72 37.28
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 31.82 35.87
CDX94861 Canola endoplasmic reticulum, golgi 31.09 35.16
CDX92981 Canola endoplasmic reticulum, golgi 31.23 35.15
CDX70565 Canola endoplasmic reticulum 31.09 34.87
CDX78577 Canola endoplasmic reticulum, golgi 30.94 34.7
CDX86634 Canola endoplasmic reticulum, golgi 31.38 34.52
CDX89824 Canola endoplasmic reticulum, golgi 31.38 34.52
CDY15505 Canola endoplasmic reticulum, golgi 31.38 34.52
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 30.94 34.42
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 30.79 34.37
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 31.23 34.35
CDY08621 Canola mitochondrion, plastid 29.33 34.25
CDY00911 Canola mitochondrion 29.33 34.19
CDY07639 Canola endoplasmic reticulum 33.72 33.97
CDX70263 Canola plastid 29.33 33.78
CDY24949 Canola endoplasmic reticulum, plasma membrane 33.43 33.73
CDY20475 Canola endoplasmic reticulum, golgi 34.02 33.67
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 35.63 33.52
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 31.67 33.33
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 33.58 33.33
CDX74837 Canola mitochondrion 33.58 33.24
CDY24913 Canola mitochondrion 32.7 33.18
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 31.96 33.03
CDX87530 Canola cytosol, golgi, peroxisome, plastid 31.38 32.97
CDX84330 Canola endoplasmic reticulum, plasma membrane 34.02 32.54
CDY33299 Canola nucleus 28.45 32.12
CDX98897 Canola golgi, mitochondrion 31.82 31.31
CDY44314 Canola endoplasmic reticulum 33.58 30.78
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 34.16 30.58
CDX94669 Canola endoplasmic reticulum 33.58 30.57
CDX99828 Canola golgi 33.58 30.53
CDY48339 Canola cytosol 33.14 29.89
CDY31339 Canola plasma membrane 33.28 29.71
CDY66535 Canola nucleus 28.45 29.62
CDY39830 Canola plasma membrane 33.28 29.4
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 32.99 28.16
CDY66721 Canola golgi 21.41 27.6
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 32.99 26.79
CDY27362 Canola plasma membrane 38.56 26.07
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 29.18 25.95
CDY26666 Canola mitochondrion 27.13 25.8
CDY67390 Canola mitochondrion 26.98 25.56
CDX70102 Canola cytosol 32.4 23.49
CDY72237 Canola nucleus 7.77 13.22
CDY33300 Canola plastid 0.88 2.51
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078J5I9UniProt:A0A078J5I9EnsemblPlants:CDY61681
ProteinID:CDY61681ProteinID:CDY61681.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00034218001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF984InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTases
SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EE13A5SEG:seg::
Description
BnaC01g40980DBnaC01g40980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5I9]
Coordinates
chrLK034025:+:34200..38550
Molecular Weight (calculated)
77582.2 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.403
Length
682 amino acids
Sequence
(BLAST)
001: MKYKDEKYEK AEKGSLKVLP KTVLLILLCG LSFYLGGLYY GKNIVQVSNV AKTGSSLDVD NSPQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPNG YKPPIRWPKS KNECWYRNVP YDWINKQKSN QHWLKKEGEK FIFPGGGTMF PNGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEI HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTV EEQRSNYEKL QDLLSSMCFK LYAKKDDIAV WQKSPDNMCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHSTPER ISDVPGGNGG LFKRDNSKWK TRAKHYKKLL PAVGSDKIRN VMDMNTAYGG LAAALVDDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SENQRCEMKY VMLEMDRILR PNGYAIIRES SYFADTIASV AKELRWSCRK EKTESESESE KLLICQKKLW LLENKVTTTT
601: IGSLSFFKSK KIFEESIEMK LSKTLSDYMM YLLIVQPSLM STVAGIACEA IIASYKSVEE MNENAIEYSS KSVLFQACML AK
Best Arabidopsis Sequence Match ( AT4G19120.1 )
(BLAST)
001: MKYKDEKYEK AEKGSRILPK TVLLILLCGL SFYLGGLYCG KNIIEVSDVA KAESSSLDVD DSLQVKSVSF SECSSDYQDY TPCTDPRKWK KYGTHRLTFM
101: ERHCPPVFDR KQCLVPPPDG YKPPIRWPKS KDECWYRNVP YDWINKQKSN QNWLRKEGEK FIFPGGGTMF PHGVSAYVDL MQDLIPEMKD GTIRTAIDTG
201: CGVASWGGDL LDRGILTVSL APRDNHEAQV QFALERGIPA ILGIISTQRL PFPSNSFDMA HCSRCLIPWT EFGGVYLLEV HRILRPGGFW VLSGPPVNYE
301: NRWKGWDTTI EEQRSNYEKL QELLSSMCFK MYAKKDDIAV WQKSPDNLCY NKLSNDPDAY PPKCDDSLEP DSAWYTPLRP CVVVPSPKLK KTDLESTPKW
401: PERLHTTPER ISDVPGGNGN VFKHDDSKWK TRAKHYKKLL PAIGSDKIRN VMDMNTAYGG LAAALVNDPL WVMNVVSSYA ANTLPVVFDR GLIGTYHDWC
501: EAFSTYPRTY DLLHVDGLFT SESQRCDMKY VMLEMDRILR PSGYAIIRES SYFADSIASV AKELRWSCRK EQTESASANE KLLICQKKLW YSSNASSETN
Arabidopsis Description
ERD3Probable methyltransferase PMT21 [Source:UniProtKB/Swiss-Prot;Acc:Q94II3]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.