Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • golgi 2
  • plasma membrane 3
  • vacuole 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17234 Canola endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 97.05 90.81
AT2G34300.3 Thale cress endoplasmic reticulum, golgi, vacuole 90.18 83.51
CDY43336 Canola cytosol 22.3 82.81
CDX90190 Canola golgi, mitochondrion, plasma membrane, plastid, vacuole 78.54 81.51
CDX99828 Canola golgi 80.36 76.4
CDY66721 Canola golgi 56.66 76.37
CDX94669 Canola endoplasmic reticulum 79.8 75.97
CDY44314 Canola endoplasmic reticulum 78.96 75.67
CDY48339 Canola cytosol 79.38 74.87
Os12t0178300-00 Rice cytosol 23.98 64.53
GSMUA_Achr8P32550_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 59.47 63.38
GSMUA_Achr7P23260_001 Banana cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 63.67 62.19
CDY33299 Canola nucleus 51.33 60.6
CDY31339 Canola plasma membrane 62.41 58.25
Os04t0692400-01 Rice mitochondrion, peroxisome 55.26 58.2
Zm00001d002943_P002 Maize plasma membrane 54.7 58.12
CDY39830 Canola plasma membrane 62.41 57.64
TraesCS2D01G569900.1 Wheat plastid 56.24 57.04
Solyc04g063230.2.1 Tomato cytosol, endoplasmic reticulum, nucleus 61.43 57.03
EES11713 Sorghum plastid 56.38 56.94
TraesCSU01G022400.1 Wheat plastid 55.68 56.31
CDY66535 Canola nucleus 51.33 55.88
EES03991 Sorghum plastid 61.85 55.75
Os01t0883900-02 Rice golgi, mitochondrion, plasma membrane, vacuole 62.97 55.71
Zm00001d012211_P008 Maize plastid 61.85 55.68
PGSC0003DMT400006139 Potato nucleus 61.85 55.33
CDY10370 Canola cytosol 21.32 55.27
GSMUA_Achr8P30140_001 Banana nucleus 61.01 55.2
CDY43782 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 61.85 55.19
TraesCS3B01G439800.3 Wheat cytosol, golgi, mitochondrion, plastid, vacuole 61.43 54.55
TraesCS3D01G401300.2 Wheat golgi 61.43 54.55
HORVU3Hr1G090970.1 Barley cytosol, golgi, mitochondrion, plastid, vacuole 61.71 54.46
TraesCS3A01G406100.1 Wheat plastid 61.43 54.21
VIT_18s0001g01270.t01 Wine grape plasma membrane 65.78 53.42
TraesCS2A01G560300.1 Wheat mitochondrion, peroxisome, plastid 55.4 53.38
CDX84478 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 61.57 52.26
GSMUA_Achr11P... Banana mitochondrion 61.01 52.22
HORVU2Hr1G127220.1 Barley cytosol 56.38 51.74
KRH64591 Soybean cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 60.45 51.68
KRH53330 Soybean endoplasmic reticulum 59.89 51.14
CDY26534 Canola extracellular, golgi, mitochondrion, plasma membrane, plastid 54.42 50.59
CDY07611 Canola endoplasmic reticulum, extracellular, vacuole 41.23 50.34
GSMUA_Achr8P08230_001 Banana cytosol, endoplasmic reticulum, golgi, mitochondrion 61.29 49.83
Os11t0186300-01 Rice plasma membrane 56.24 46.25
CDY43341 Canola endoplasmic reticulum, golgi, vacuole 39.13 46.12
HORVU4Hr1G017470.1 Barley vacuole 56.24 44.96
TraesCS4D01G094600.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole 55.82 44.57
TraesCS4B01G098500.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole 55.96 44.53
TraesCS4A01G220000.1 Wheat golgi 55.82 44.52
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 55.68 44.41
CDY70936 Canola cytosol 11.36 44.26
Zm00001d004720_P001 Maize golgi 56.1 44.15
HORVU5Hr1G037320.6 Barley cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid 56.94 43.56
CDY24913 Canola mitochondrion 40.81 43.3
CDX76062 Canola endoplasmic reticulum, golgi, vacuole 39.41 42.58
CDX85977 Canola cytosol 27.91 41.2
CDX93797 Canola cytosol 27.91 41.2
CDY50730 Canola cytosol 28.61 41.13
CDX94861 Canola endoplasmic reticulum, golgi 33.8 39.97
CDX92981 Canola endoplasmic reticulum, golgi 33.94 39.93
TraesCS5B01G120300.1 Wheat endoplasmic reticulum, golgi, mitochondrion, plasma membrane 56.8 39.74
TraesCS5D01G127100.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 56.66 39.72
CDX76494 Canola endoplasmic reticulum, golgi 32.54 39.59
CDY68608 Canola endoplasmic reticulum, golgi, vacuole 33.94 39.48
CDY09274 Canola cytosol, endoplasmic reticulum, golgi 32.68 39.42
CDX85084 Canola endoplasmic reticulum, golgi, vacuole 33.66 39.28
CDY01971 Canola endoplasmic reticulum, extracellular 22.86 39.18
TraesCS5A01G114100.1 Wheat endoplasmic reticulum 56.52 38.79
Zm00001d041844_P021 Maize golgi, mitochondrion, nucleus, plasma membrane, plastid 57.22 38.64
CDX89824 Canola endoplasmic reticulum, golgi 33.52 38.55
CDY18232 Canola endoplasmic reticulum, golgi, plasma membrane 33.52 38.55
CDX70565 Canola endoplasmic reticulum 32.82 38.49
CDX78577 Canola endoplasmic reticulum, golgi 32.54 38.16
CDY70748 Canola cytosol, peroxisome 23.0 38.14
CDY07639 Canola endoplasmic reticulum 36.19 38.11
CDY24949 Canola endoplasmic reticulum, plasma membrane 36.04 38.02
CDX99540 Canola cytosol 28.61 37.99
CDY26666 Canola mitochondrion 38.15 37.94
CDX83493 Canola golgi 22.02 37.92
CDY25257 Canola cytosol 32.96 37.9
CDX94256 Canola cytosol 32.82 37.8
CDX70263 Canola plastid 31.28 37.67
CDX87530 Canola cytosol, golgi, peroxisome, plastid 34.22 37.6
KXG23110 Sorghum endoplasmic reticulum 57.36 37.59
CDX86634 Canola endoplasmic reticulum, golgi 32.68 37.58
CDY15505 Canola endoplasmic reticulum, golgi 32.68 37.58
CDY12278 Canola endoplasmic reticulum, golgi 31.56 37.5
CDY46435 Canola endoplasmic reticulum, golgi 31.7 37.48
CDY07198 Canola mitochondrion 31.42 37.4
CDY67390 Canola mitochondrion 37.73 37.36
CDY45006 Canola endoplasmic reticulum, golgi 31.7 37.36
CDX91893 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 31.28 37.35
CDY22567 Canola endoplasmic reticulum, golgi 31.42 37.33
CDY47694 Canola cytosol, endoplasmic reticulum, golgi 31.56 37.31
CDY47695 Canola cytosol, endoplasmic reticulum, golgi 31.56 37.31
CDY67792 Canola cytosol, endoplasmic reticulum, golgi 31.56 37.31
CDY40268 Canola endoplasmic reticulum, golgi 31.7 37.29
CDX98897 Canola golgi, mitochondrion 36.19 37.23
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 33.8 37.19
CDX74348 Canola plastid 31.14 37.19
CDX74837 Canola mitochondrion 35.9 37.16
CDY16198 Canola endoplasmic reticulum, golgi 31.56 37.13
CDX99539 Canola cytosol 32.26 36.8
CDY20475 Canola endoplasmic reticulum, golgi 35.48 36.72
CDX84046 Canola cytosol 31.42 36.6
CDY00911 Canola mitochondrion 29.87 36.41
CDY44966 Canola cytosol 31.28 35.97
CDY54063 Canola mitochondrion 27.91 35.92
CDX78823 Canola endoplasmic reticulum, golgi, vacuole 31.14 35.81
CDY08621 Canola mitochondrion, plastid 29.31 35.79
CDY51142 Canola cytosol 30.86 35.66
CDY03207 Canola cytosol, endoplasmic reticulum, golgi, mitochondrion 30.57 35.05
CDY01583 Canola endoplasmic reticulum, plasma membrane, vacuole 32.12 34.86
CDX98606 Canola vacuole 32.26 34.64
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 30.43 34.55
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 30.43 34.34
CDY18904 Canola endoplasmic reticulum 30.43 34.28
CDY61681 Canola endoplasmic reticulum, golgi 32.54 34.02
CDY57187 Canola cytosol 14.87 33.97
CDY68187 Canola mitochondrion 28.75 33.23
CDX78919 Canola cytosol, golgi 32.54 32.81
CDY35169 Canola cytosol, endoplasmic reticulum, golgi 30.86 30.34
CDY72237 Canola nucleus 16.13 28.68
CDX70102 Canola cytosol 36.47 27.63
CDY27362 Canola plasma membrane 30.57 21.61
CDY33300 Canola plastid 3.79 11.3
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.150MapMan:35.1GO:A0A078D5B9EnsemblPlants:CDX84330ProteinID:CDX84330
ProteinID:CDX84330.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0008168
GO:GO:0016740EnsemblPlantsGene:GSBRNA2T00141445001PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF1056InterPro:Put_SAM_MeTrfase
InterPro:SAM-dependent_MTasesSUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0004EF148CSEG:seg:
Description
BnaC04g10920D
Coordinates
chrLK031836:+:1852438..1855962
Molecular Weight (calculated)
80653.2 Da
IEP (calculated)
5.436
GRAVY (calculated)
-0.596
Length
713 amino acids
Sequence
(BLAST)
001: MAMGKYSRVD GKKSSSYGLT ITIVLIVSLC LVGTWMFTSS WSASDDSAGY SSTDTAKDVD SVTKNVAEEK KEENEAVTEN SQVKTEPEES SGEKTEVVED
101: RKENGDGDEE KEKIVKEVES ESDESKEKVK SNKEVFPAGD QAEITKETTT KDGSWSTQLV ESQNEKKAQE SSVPKDQQSS YEWKTCNVTA GPDYIPCLDN
201: LQVIKKLQST MHYEHRERHC PEESPRCLVS LPDGYKRSIK WPNSREKIWY NNVPHTKLAA IKGHQNWVKM SGEHLTFPGG GTQFVNGALH YIDFIQESYP
301: AIAWGNRTRV ILDVGCGVAS FGGFLFERDV LALSFAPKDE HEAQVQFALE RGIPAMLNVM GTKRLPFPGS VFDLIHCARC RVPWHIEGGK LLLELNRALR
401: PGGFFVWSAT PVYRKNEEDS GIWKAMSELT KAMCWKLVTI KKDKLNEVGA AIYQKPTTNE CYNKRPQNDP PLCKDSDDQN AAWNVPLEAC MHKVTEDSSK
501: RGASWPNMWP ERLETAPEWL DSQEGVYGKP APEDFAADQE KWKTVVAKSY IDGMGIDWSN VRNVMDMRAV YGGFAAALKD LKLWVMNVVP VDAPDTLPII
601: YERGLFGIYH DWCESFNTYP RTYDLLHADH LFSTLRKRCK LESVMAEVDR ILRPEGTFII RDDMETIGEV EKMVKSMKWE VKTTQSKDNE GLLSIKKSWW
701: RPTQTETIKS AIA
Best Arabidopsis Sequence Match ( AT2G34300.1 )
(BLAST)
001: MAMGKYSRVD GKKSSSYGLT ITIVLLLSLC LVGTWMFMSS WSAPADSAGY SSTDTAKDVS KNDLRKEEGD RDPKNFSDEK NEENEAATEN NQVKTDSENS
101: AEGNQVNESS GEKTEAGEER KESDDNNGDG DGEKEKNVKE VGSESDETTQ KEKTQLEEST EENKSEDGNG NEEKAEENAS ETEESTEKSS KEVFPAGDQA
201: EITKESSTGD GAWSTQLVES QNEKKAQQSS ISKDQSSYGW KTCNVTAGPD YIPCLDNWQA IKKLHTTMHY EHRERHCPEE SPHCLVSLPD GYKRSIKWPK
301: SREKIWYNNV PHTKLAEIKG HQNWVKMSGE HLTFPGGGTQ FKNGALHYID FIQQSHPAIA WGNRTRVILD VGCGVASFGG YLFERDVLAL SFAPKDEHEA
401: QVQFALERGI PAMLNVMGTK RLPFPGSVFD LIHCARCRVP WHIEGGKLLL ELNRALRPGG FFVWSATPVY RKNEEDSGIW KAMSELTKAM CWKLVTIKKD
501: KLNEVGAAIY QKPTSNKCYN KRPQNEPPLC KDSDDQNAAW NVPLEACMHK VTEDSSKRGA VWPNMWPERV ETAPEWLDSQ EGVYGKPAPE DFTADQEKWK
601: TIVSKAYLND MGIDWSNVRN VMDMRAVYGG FAAALKDLKL WVMNVVPVDA PDTLPIIYER GLFGIYHDWC ESFNTYPRTY DLLHADHLFS TLRKRCNLVS
701: VMAEIDRILR PQGTFIIRDD METLGEVEKM VKSMKWKVKM TQSKDNEGLL SIEKSWWRPE ETETIKSAIA
Arabidopsis Description
Probable methyltransferase PMT25 [Source:UniProtKB/Swiss-Prot;Acc:Q0WT31]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.