Factsheet for TraesCS3D01G401300.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G439800.3	Wheat	cytosol, golgi, mitochondrion, plastid, vacuole	98.88	98.88
TraesCS3A01G406100.1	Wheat	plastid	98.51	97.9
HORVU3Hr1G090970.1	Barley	cytosol, golgi, mitochondrion, plastid, vacuole	96.39	95.79
Os01t0883900-02	Rice	golgi, mitochondrion, plasma membrane, vacuole	83.06	82.75
EES03991	Sorghum	plastid	81.44	82.68
Zm00001d012211_P008	Maize	plastid	80.7	81.82
CDY43336	Canola	cytosol	17.56	73.44
Bra010830.1-P	Field mustard	golgi	55.79	65.69
CDX90190	Canola	golgi, mitochondrion, plasma membrane, plastid, vacuole	55.92	65.36
GSMUA_Achr8P30140_001	Banana	nucleus	63.01	64.21
TraesCS2D01G569900.1	Wheat	plastid	55.79	63.73
CDY44314	Canola	endoplasmic reticulum	57.16	61.69
CDX84330	Canola	endoplasmic reticulum, plasma membrane	54.55	61.43
Bra030140.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	57.29	61.33
CDX94669	Canola	endoplasmic reticulum	57.16	61.28
CDX99828	Canola	golgi	57.16	61.2
KRH53915	Soybean	endoplasmic reticulum	61.39	61.17
GSMUA_Achr11P...	Banana	mitochondrion	63.26	60.98
CDY48339	Canola	cytosol	57.29	60.85
CDY31339	Canola	plasma membrane	57.78	60.73
KRH64022	Soybean	endoplasmic reticulum	61.15	60.62
Bra032319.1-P	Field mustard	cytosol	56.79	60.56
AT1G29470.1	Thale cress	golgi	57.78	60.26
CDY39830	Canola	plasma membrane	57.91	60.23
CDY66721	Canola	golgi	39.6	60.11
KRH59591	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	61.52	59.45
PGSC0003DMT400059933	Potato	golgi	60.15	59.41
Solyc05g056580.2.1	Tomato	golgi	59.9	59.16
VIT_04s0044g01670.t01	Wine grape	cytosol	60.65	59.03
AT2G34300.3	Thale cress	endoplasmic reticulum, golgi, vacuole	56.41	58.83
CDY17234	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	55.67	58.66
Bra005438.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	55.54	58.53
KRH40943	Soybean	golgi	61.27	58.43
AT5G64030.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	60.02	58.14
CDY43782	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	57.53	57.82
Solyc04g063230.2.1	Tomato	cytosol, endoplasmic reticulum, nucleus	54.55	57.03
CDX84478	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	58.53	55.95
VIT_18s0001g01270.t01	Wine grape	plasma membrane	60.27	55.13
PGSC0003DMT400006139	Potato	nucleus	54.55	54.96
KRH64591	Soybean	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	54.79	52.76
KRH53330	Soybean	endoplasmic reticulum	54.3	52.22
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	55.79	50.17
Bra024260.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	57.04	49.04
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	37.73	45.43
TraesCS7D01G380100.1	Wheat	mitochondrion	51.06	44.91
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	53.55	42.28
TraesCS3D01G342700.1	Wheat	golgi	36.36	40.78
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	31.01	40.42
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	30.01	39.38
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	34.0	39.11
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	29.27	38.91
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	28.02	38.86
TraesCS7D01G433000.1	Wheat	plastid	29.51	38.66
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	29.51	38.6
TraesCS1D01G238600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	28.77	38.5
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	29.14	38.49
TraesCS2D01G397900.1	Wheat	mitochondrion	30.26	38.09
TraesCS5D01G418500.1	Wheat	mitochondrion	34.25	38.04
TraesCS6D01G025000.1	Wheat	cytosol	29.89	38.03
TraesCS6D01G237200.1	Wheat	golgi	30.26	37.79
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	28.77	37.38
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	28.77	36.73
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	26.15	34.48

Protein Annotations

EnsemblPlants:TraesCS3D01G401300.2	EnsemblPlantsGene:TraesCS3D01G401300	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR10108
PANTHER:PTHR10108:SF1054	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr3D:+:515959674..515963696

Molecular Weight (calculated)

90166.0 Da

IEP (calculated)

5.129

GRAVY (calculated)

-0.699

Length

803 amino acids

Sequence
(BLAST)

001: MAFGRGAKMD GRRPSSPSSS MCTTTTVVVF VALCMVGAWM MTSTTVFPVE PTSNKKSEPI EVSTSNKKTE VKDQRAEVGF GETDEAAKSG SVSSEKFEDT
101: DNNDNVPDES HSNRDAPEEE KFPENTMEKP VEMAEEKESP KEKEDSKDSF DDANGKSEGQ SAKEGGVTGQ SGDEEEKITT DNDVEKSDGE KKEDQEGKSE
201: DDATEQPQIE EKVEESGEKE PAAKANEVFP DGAQSELLKE SNTENGSFPT QAAESKNEKE AQAASKSSGD EITYSWKLCN SSAVTDYIPC LDNEKAIKKL
301: HSTKHYEHRE RHCPAEPPTC LVPLPEGYKR PIEWPKSRDK VWYSNVPHTK LAEYKGHQNW VKVSGDHLLF PGGGTQFKNG ALHYIDTIQQ ALPDIAWGKR
401: SRVILDVGCG VASFGGYMFD RDVLTMSFAP KDEHEAQVQF ALERGIPAIS AVMGTKRLPY PSRVFDVIHC ARCRVPWHIE GGKLLLELNR LLRPGGYFVW
501: SATPVYQKLP EDVEIWNAMS SLTKSMCWKM VKKTKDTLNQ VGMAIYQKPM DNNCYEKRSE DSPPLCKETD DADAAWNVPL QACIPKLPIG PSVRGSKWPE
601: MWPQRLEKTP FWIDGSRVGV YGKPANEDFE ADYAHWKRVV SKSYVNGMGI DWSKVRNVMD MRAVYGGFAA ALRDQKVWVM NIVPIDSADT LPIVYERGLF
701: GMYHDWCESF STYPRTYDLL HADHLFSKLK KRCKLLGVFA EVDRILRPEG KLIVRDDAET ISELESMAKS LQWEVRMTYA KGKEGLLCVQ KTTWRPKEIE
801: ASM

Best Arabidopsis Sequence Match ( AT5G64030.1 )
(BLAST)

001: MAQPRYTRID NRRPSSNYCS TVTVVVFVAL CLVGIWMMTS SSVGPAQNVD EVSLDNKDGI KKQMTPPAEE GNGQKFEDAP VETPNEDKKG DGDASLPKED
101: ESSSKQDNQE EKKEEKTKEE FTPSSETKSE TEGGEDQKDD SKSENGGGGD LDEKKDLKDN SDEENPDTNE KQTKPETEDN ELGEDGENQK QFESDNGEKK
201: SIDDDKKSSD DDKENKTGNE DTETKTEKEN TETNVDVQVE QEGQSKNETS GDLSPPGAQL ELLNETTAQN GSFSTQATES KNEKEAQKGS GDKLDYKWAL
301: CNTTAGPDYI PCLDNVQAIR SLPSTKHYEH RERHCPDSPP TCLVPLPDGY KRPIEWPKSR EKIWYTNVPH TKLAEYKGHQ NWVKVTGEYL TFPGGGTQFK
401: HGALHYIDFI QESVPAIAWG KRSRVVLDVG CGVASFGGFL FDRDVITMSL APKDEHEAQV QFALERGIPA ISAVMGTTRL PFPGRVFDIV HCARCRVPWH
501: IEGGKLLLEL NRVLRPGGFF VWSATPVYQK KTEDVEIWKA MSELIKKMCW ELVSINKDTI NGVGVATYRK PTSNECYKNR SEPVPPICAD SDDPNASWKV
601: PLQACMHTAP EDKTQRGSQW PEQWPARLEK APFWLSSSQT GVYGKAAPED FSADYEHWKR VVTKSYLNGL GINWASVRNV MDMRAVYGGF AAALRDLKVW
701: VMNVVPIDSP DTLAIIYERG LFGIYHDWCE SFSTYPRSYD LLHADHLFSK LKQRCNLTAV IAEVDRVLRP EGKLIVRDDA ETIQQVEGMV KAMKWEVRMT
801: YSKEKEGLLS VQKSIWRPSE VETLTYAIG

Arabidopsis Description

Probable methyltransferase PMT26 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7V3]
SUBAcon: [mitochondrion,endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.