Factsheet for TraesCS4D01G150500.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	98.06	98.06
HORVU4Hr1G033650.3	Barley	endoplasmic reticulum	94.5	92.99
TraesCS4A01G163200.1	Wheat	endoplasmic reticulum	94.66	92.86
EES08791	Sorghum	golgi	80.74	79.08
Zm00001d007592_P001	Maize	extracellular, golgi	61.49	76.15
Os11t0601600-01	Rice	golgi	78.8	74.69
TraesCS5D01G234300.1	Wheat	endoplasmic reticulum, golgi	65.37	65.8
TraesCS5D01G429900.1	Wheat	endoplasmic reticulum, golgi, vacuole	62.78	63.4
TraesCS1D01G216200.1	Wheat	endoplasmic reticulum, golgi	60.52	61.92
TraesCS2D01G397900.1	Wheat	mitochondrion	53.72	52.04
TraesCS6D01G237200.1	Wheat	golgi	53.07	51.01
TraesCS7D01G027500.1	Wheat	endoplasmic reticulum, golgi	51.62	50.72
TraesCS6D01G025000.1	Wheat	cytosol	49.35	48.34
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	39.81	42.49
TraesCS3D01G389400.1	Wheat	endoplasmic reticulum	41.42	42.04
TraesCS1D01G202300.2	Wheat	endoplasmic reticulum	39.81	40.46
TraesCS7D01G433000.1	Wheat	plastid	36.25	36.54
TraesCS1D01G153300.1	Wheat	endoplasmic reticulum, golgi	36.08	36.2
TraesCS1D01G238600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	33.33	34.33
TraesCS2D01G569900.1	Wheat	plastid	36.25	31.86
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	35.11	31.09
TraesCS1D01G294500.1	Wheat	golgi, plasma membrane, plastid	33.5	31.03
TraesCS3D01G342700.1	Wheat	golgi	33.98	29.33
TraesCS3D01G401300.2	Wheat	golgi	37.38	28.77
TraesCS7D01G380100.1	Wheat	mitochondrion	36.57	24.75
TraesCS4D01G094600.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, plastid, vacuole	35.76	24.75
TraesCS5D01G418500.1	Wheat	mitochondrion	28.8	24.62
TraesCS5D01G127100.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	35.44	21.53

Protein Annotations

EnsemblPlants:TraesCS4D01G150500.1	EnsemblPlantsGene:TraesCS4D01G150500	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	ncoils:Coil
PANTHER:PTHR10108	PANTHER:PTHR10108:SF999	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:168196378..168199274

Molecular Weight (calculated)

68781.3 Da

IEP (calculated)

7.761

GRAVY (calculated)

-0.329

Length

618 amino acids

Sequence
(BLAST)

001: MAIKGNSGEY KARSPLGMVI TVLLCCFFYV LGAWQRSGYG KGDRIAVAVT RQTACSGASA AGLSFETHHT GGLANATTSG LGGEPPPPCA AALADHTPCH
101: DQDRAMKFPR KNMVYRERHC PSDGERLRCL VPAPPGYVTP FPWPKSRDYV PYANAPYKSL TVEKAVQNWV QYEGAVLRFP GGGTQFPHGA DKYIDQLASV
201: VPFADGSVRT VLDTGCGVAS LGAYLDSRGV MAMSFAPRDS HEAQVQFALE RGVPAFIGVL GSVKLPFPPR SFDMAHCSRC LIPWSGNGGM YMMEVDRVLR
301: PGGYWVLSGP PINWKANHRK WERAEEDLAG EQKRIEEYAQ MLCWEKVTEM DEIGVWRKRT DTAACPAMPP AVRACDPANP DDVWYKNMET CITPSSTAAG
401: GELQPFPERL KAIPPRISSG AVQGFTVESY EEEKRRWERH VKAYTKVNYK LDTKRYRNIM DMNAGVGGFA AAIFSPMSWV MNVVPTAAEL STLGVIYERG
501: LIGIYHDWCE AFSTYPRTYD LIHANGVFSL YRDNCKMEDI LLEMDRILRP EGTVILRDDI DVLLRVDKVA MGMRWKTMMA NHEDSPHIRE KVLYAVKRYW
601: TADSDKSSQE KKATSSEV

Best Arabidopsis Sequence Match ( AT1G26850.1 )
(BLAST)

001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH

Arabidopsis Description

Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.