Factsheet for TraesCS4A01G163200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G150500.1	Wheat	endoplasmic reticulum	92.86	94.66
TraesCS4B01G125500.1	Wheat	endoplasmic reticulum	92.86	94.66
HORVU4Hr1G033650.3	Barley	endoplasmic reticulum	91.75	92.04
EES08791	Sorghum	golgi	78.1	77.97
Zm00001d007592_P001	Maize	extracellular, golgi	59.52	75.15
Os11t0601600-01	Rice	golgi	76.35	73.77
TraesCS5A01G226900.1	Wheat	golgi	64.13	65.8
TraesCS5A01G421600.2	Wheat	endoplasmic reticulum	60.48	61.35
TraesCS1A01G213400.1	Wheat	endoplasmic reticulum, golgi	58.41	60.93
TraesCS2A01G400300.1	Wheat	mitochondrion	51.59	51.26
TraesCS4A01G458400.1	Wheat	endoplasmic reticulum, golgi	50.16	50.24
TraesCS7A01G031100.1	Wheat	endoplasmic reticulum, golgi	49.52	49.6
TraesCS6A01G256000.1	Wheat	mitochondrion	49.68	48.83
TraesCS6A01G021300.1	Wheat	cytosol	47.62	47.54
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	38.41	42.01
TraesCS3A01G395800.1	Wheat	endoplasmic reticulum	39.68	40.85
TraesCS3A01G475800.1	Wheat	cytosol	32.38	40.64
TraesCS1A01G198600.1	Wheat	golgi	38.73	38.85
TraesCS7A01G444200.1	Wheat	plastid	35.56	36.84
TraesCS1A01G233500.1	Wheat	endoplasmic reticulum, plasma membrane	33.17	34.83
TraesCS1A01G154400.2	Wheat	golgi	34.76	34.82
TraesCS3A01G362600.1	Wheat	golgi	34.76	31.2
TraesCS1A01G297000.1	Wheat	golgi	31.9	30.23
TraesCS2A01G560300.1	Wheat	mitochondrion, peroxisome, plastid	34.44	29.32
TraesCS3A01G348800.1	Wheat	golgi	32.86	29.2
TraesCS3A01G406100.1	Wheat	plastid	36.03	28.09
TraesCS5A01G408700.1	Wheat	mitochondrion	27.3	24.02
TraesCS4A01G220000.1	Wheat	golgi	33.49	23.6
TraesCS7A01G383700.2	Wheat	plastid	33.33	22.9
TraesCS5A01G114100.1	Wheat	endoplasmic reticulum	34.6	20.98

Protein Annotations

EnsemblPlants:TraesCS4A01G163200.1	EnsemblPlantsGene:TraesCS4A01G163200	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	ncoils:Coil
PANTHER:PTHR10108	PANTHER:PTHR10108:SF999	PFAM:PF03141	SUPFAM:SSF53335	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr4A:+:363710574..363713421

Molecular Weight (calculated)

69910.6 Da

IEP (calculated)

8.015

GRAVY (calculated)

-0.330

Length

630 amino acids

Sequence
(BLAST)

001: MAIKGNSGEY KARSPLGMVI AVLLCCFFYV LGAWQRSGYG KGDSIVVAVT RQTACASASA VGLSFETHHT GGLANATTSG LGGKPPPSFA PCAAALTDHT
101: PCHDQDRAMK FPRKNMVYRE RHCPSDGDRL RCLVPAPPGY VTPFPWPKSR DYVPYANAPY KSLTVEKAVQ NWVQYEGAVF RFPGGGTQFP HGADKYIDQL
201: ASVVPFADGS VRSVLDTGCG VASLGAYLDS RGVMAMSFAP RDSHEAQVQF ALERGVPAFI GVLGSVKLPF PPRSFDMAHC SRCLIQWSGN GGMYMMEVDR
301: VLGPGGYWVL SGPPINWKAN HRKWQRTEED LGGEQKRIEE YAQMLCWEKV TEMAEIGVWR KRTDTAACPA MPPAVQACDP ANPDDVWYKN METCITPSTT
401: AAGGELQSFP ERLKAIPPRI SSGAVQGFIV ESYEEENRRW ERHVKAYRKV NYKLDTKRYR NIMDMNAGVG GFAAAIFSPM SWVMNVVPTA AELSTLGVIY
501: ERGLIGIYHD WCEAFSTYPR TYDLIHANGV FNIYRDKCKM EDIMLEMDRI LRPEGTVILR DDINVLLRVD KVATGMRWKT MMANHEDSPH IREKVLYAIK
601: PYWTADSDKS SQDQEKKATS SKGKGSDSEV

Best Arabidopsis Sequence Match ( AT1G26850.1 )
(BLAST)

001: MALKSSSADG KTRSSVQIFI VFSLCCFFYI LGAWQRSGFG KGDSIALEMT NSGADCNIVP SLNFETHHAG ESSLVGASEA AKVKAFEPCD GRYTDYTPCQ
101: DQRRAMTFPR DSMIYRERHC APENEKLHCL IPAPKGYVTP FSWPKSRDYV PYANAPYKAL TVEKAIQNWI QYEGDVFRFP GGGTQFPQGA DKYIDQLASV
201: IPMENGTVRT ALDTGCGVAS WGAYLWSRNV RAMSFAPRDS HEAQVQFALE RGVPAVIGVL GTIKLPYPTR AFDMAHCSRC LIPWGANDGM YLMEVDRVLR
301: PGGYWILSGP PINWKVNYKA WQRPKEDLQE EQRKIEEAAK LLCWEKKYEH GEIAIWQKRV NDEACRSRQD DPRANFCKTD DTDDVWYKKM EACITPYPET
401: SSSDEVAGGE LQAFPDRLNA VPPRISSGSI SGVTVDAYED DNRQWKKHVK AYKRINSLLD TGRYRNIMDM NAGFGGFAAA LESQKLWVMN VVPTIAEKNR
501: LGVVYERGLI GIYHDWCEAF STYPRTYDLI HANHLFSLYK NKCNADDILL EMDRILRPEG AVIIRDDVDT LIKVKRIIAG MRWDAKLVDH EDGPLVPEKV
601: LIAVKQYWVT NSTSTH

Arabidopsis Description

Probable methyltransferase PMT2 [Source:UniProtKB/Swiss-Prot;Acc:B9DFI7]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.