Factsheet for TraesCS2A01G400900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

mitochondrion 4
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G398400.1	Wheat	golgi, mitochondrion, plastid	96.88	96.37
TraesCS2B01G419000.1	Wheat	golgi, plastid	96.35	96.02
HORVU2Hr1G095160.7	Barley	plastid	97.22	93.49
Os04t0569400-00	Rice	golgi, mitochondrion	88.89	87.37
HORVU6Hr1G056160.1	Barley	cytosol	69.97	86.85
KXG26938	Sorghum	endoplasmic reticulum, golgi, mitochondrion, plastid	85.94	84.47
Zm00001d002631_P003	Maize	endoplasmic reticulum, golgi, mitochondrion, plastid	84.55	81.99
GSMUA_Achr5P20080_001	Banana	mitochondrion	72.22	68.99
GSMUA_Achr11P...	Banana	golgi, mitochondrion	70.49	67.67
Solyc01g091640.2.1	Tomato	nucleus	67.88	65.28
PGSC0003DMT400071375	Potato	mitochondrion	67.88	65.28
VIT_15s0048g01990.t01	Wine grape	mitochondrion	67.53	65.16
KRH48238	Soybean	endoplasmic reticulum	66.32	64.31
KRH00643	Soybean	endoplasmic reticulum, mitochondrion	65.97	63.76
KRH40535	Soybean	plastid	65.8	63.48
KRH65147	Soybean	endoplasmic reticulum	65.8	63.48
CDX91893	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	65.45	63.15
AT4G00740.1	Thale cress	golgi	65.62	63.0
Bra000959.1-P	Field mustard	plastid	65.28	62.98
CDX74348	Canola	plastid	64.93	62.65
CDY07198	Canola	mitochondrion	63.54	61.1
CDY51142	Canola	cytosol	62.85	58.67
Bra037356.1-P	Field mustard	mitochondrion	63.19	52.6
TraesCS2A01G400300.1	Wheat	mitochondrion	45.83	41.64
TraesCS1A01G213400.1	Wheat	endoplasmic reticulum, golgi	43.58	41.56
TraesCS5A01G226900.1	Wheat	golgi	43.75	41.04
TraesCS3A01G475800.1	Wheat	cytosol	35.42	40.64
TraesCS4A01G458400.1	Wheat	endoplasmic reticulum, golgi	44.1	40.38
TraesCS6A01G256000.1	Wheat	mitochondrion	44.44	39.94
TraesCS7A01G031100.1	Wheat	endoplasmic reticulum, golgi	43.58	39.9
TraesCS6A01G021300.1	Wheat	cytosol	43.58	39.78
TraesCS5A01G421600.2	Wheat	endoplasmic reticulum	42.19	39.13
TraesCS4A01G163200.1	Wheat	endoplasmic reticulum	42.01	38.41
TraesCS1A01G198600.1	Wheat	golgi	41.15	37.74
TraesCS3A01G395800.1	Wheat	endoplasmic reticulum	38.72	36.44
TraesCS7A01G444200.1	Wheat	plastid	38.19	36.18
TraesCS1A01G233500.1	Wheat	endoplasmic reticulum, plasma membrane	35.94	34.5
TraesCS1A01G154400.2	Wheat	golgi	37.15	34.02
TraesCS1A01G297000.1	Wheat	golgi	37.5	32.48
TraesCS3A01G362600.1	Wheat	golgi	37.5	30.77
TraesCS2A01G560300.1	Wheat	mitochondrion, peroxisome, plastid	39.41	30.68
TraesCS3A01G348800.1	Wheat	golgi	37.5	30.47
TraesCS3A01G406100.1	Wheat	plastid	38.72	27.6
TraesCS5A01G408700.1	Wheat	mitochondrion	32.64	26.26
TraesCS4A01G220000.1	Wheat	golgi	37.5	24.16
TraesCS7A01G383700.2	Wheat	plastid	36.28	22.79
TraesCS5A01G114100.1	Wheat	endoplasmic reticulum	39.76	22.04

Protein Annotations

MapMan:21.3.1.1.2	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016740	GO:GO:0052546	PFAM:PF03141	PANTHER:PTHR10108
PANTHER:PTHR10108:SF763	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G400900
EnsemblPlants:TraesCS2A01G400900.1	TIGR:cd02440	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:654869846..654873649

Molecular Weight (calculated)

64283.5 Da

IEP (calculated)

8.660

GRAVY (calculated)

-0.177

Length

576 amino acids

Sequence
(BLAST)

001: MGLLSSLRPH RRGSGGGGAQ WQWSFLDAVW AVFLVAVVVF LALVFTPRRG DTLAAAVVPP CAASEVDLLP CEDPRRSSRL SREMNYYRER HCPARGEAPA
101: CLVPPPPGYR VPVPWPESLH KIWHDNMPYG KIAERKGHQG WMKQEGSYFL FPGGGTMFPD GAEQYIEKLT KYVPLRSGLL RTGLDMGCGV ASFGGFLLKE
201: NITALSFAPR DSHKSQIQFA LERGIPAFLL MLGTRRLPFP AQSFDFVHCS RCLIPFTAYN GSYLIEVDRL LRPGGYLIIS GPPVQWKKQE KEWGELQAMA
301: RSLCYNLVTV DGNTAIWKKP SQAACLPNQN QFGLDLCSTD DDPDEAWYFK LKKCISKVSL SEEIAVGSID KWPNRLSKPS ARASFMDDGV NLFEADTQKW
401: FKRVSYYKRS LGVKLGTALI RNVMDMNAFF GGLAAAVASD PVWVMNVVPA KKPLTLGVIY DRGLIGVYHD WCEPFSTYPR TYDLIHADGI NSLISDPKSG
501: RSRCDLFDVM LEMDRILRPE GTAVIRDSPD VINKAVQVAR SIRWTTQVHD SEPESSSAEK ILVATKTFWK LPLTSG

Best Arabidopsis Sequence Match ( AT4G00740.2 )
(BLAST)

001: MGHVNLPASK RGNPRQWRLL DIVTAAFFGI VLLFFILLFT PLGDSMAASG RQTLLLSTAS DPRQRQRLVT LVEAGQHLQP IEYCPAEAVA HMPCEDPRRN
101: SQLSREMNFY RERHCPLPEE TPLCLIPPPS GYKIPVPWPE SLHKIWHANM PYNKIADRKG HQGWMKREGE YFTFPGGGTM FPGGAGQYIE KLAQYIPLNG
201: GTLRTALDMG CGVASFGGTL LSQGILALSF APRDSHKSQI QFALERGVPA FVAMLGTRRL PFPAYSFDLM HCSRCLIPFT AYNATYFIEV DRLLRPGGYL
301: VISGPPVQWP KQDKEWADLQ AVARALCYEL IAVDGNTVIW KKPVGDSCLP SQNEFGLELC DESVPPSDAW YFKLKRCVTR PSSVKGEHAL GTISKWPERL
401: TKVPSRAIVM KNGLDVFEAD ARRWARRVAY YRDSLNLKLK SPTVRNVMDM NAFFGGFAAT LASDPVWVMN VIPARKPLTL DVIYDRGLIG VYHDWCEPFS
501: TYPRTYDFIH VSGIESLIKR QDSSKSRCSL VDLMVEMDRI LRPEGKVVIR DSPEVLDKVA RMAHAVRWSS SIHEKEPESH GREKILIATK SLWKLPSNSH

Arabidopsis Description

Probable methyltransferase PMT13 [Source:UniProtKB/Swiss-Prot;Acc:Q93W95]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.