Factsheet for TraesCS3A01G362600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, mitochondrion, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G356400.1	Wheat	endoplasmic reticulum	97.29	97.85
TraesCS3B01G395100.1	Wheat	plastid	97.15	96.46
HORVU3Hr1G085900.1	Barley	golgi, plastid	94.3	88.5
EES03874	Sorghum	mitochondrion	83.48	85.17
Os01t0846600-01	Rice	mitochondrion	83.05	84.86
Zm00001d042883_P001	Maize	mitochondrion, plastid	81.91	82.73
Zm00001d012400_P007	Maize	plasma membrane	76.21	82.56
GSMUA_Achr5P28990_001	Banana	cytosol	58.12	73.25
CDY24949	Canola	endoplasmic reticulum, plasma membrane	62.68	65.09
CDY07639	Canola	endoplasmic reticulum	62.39	64.7
Bra000145.1-P	Field mustard	endoplasmic reticulum	62.39	64.6
KRH15065	Soybean	nucleus	60.26	63.7
KRH73069	Soybean	endoplasmic reticulum	59.54	63.53
PGSC0003DMT400069783	Potato	endoplasmic reticulum	61.11	63.27
Solyc05g052970.2.1	Tomato	endoplasmic reticulum	61.11	63.27
VIT_13s0019g02250.t01	Wine grape	golgi	61.82	63.27
AT2G39750.1	Thale cress	endoplasmic reticulum, golgi	62.25	62.97
VIT_18s0001g01600.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	59.54	62.76
KRG97843	Soybean	endoplasmic reticulum	59.12	62.59
CDY20475	Canola	endoplasmic reticulum, golgi	61.4	62.55
CDX74837	Canola	mitochondrion	61.11	62.26
Bra005018.1-P	Field mustard	mitochondrion	61.11	61.82
KRH31030	Soybean	endoplasmic reticulum, plasma membrane	58.69	61.49
PGSC0003DMT400059283	Potato	cytosol	48.29	61.08
CDX87530	Canola	cytosol, golgi, peroxisome, plastid	56.27	60.86
CDX88354	Canola	cytosol, endoplasmic reticulum, golgi	56.13	60.8
CDX98897	Canola	golgi, mitochondrion	59.83	60.61
AT5G06050.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	58.69	60.41
Bra015681.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	55.7	60.34
AT1G77260.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	56.27	60.31
KRH16455	Soybean	endoplasmic reticulum, golgi	56.55	60.15
KRH18054	Soybean	endoplasmic reticulum, golgi	56.13	59.43
Solyc04g058180.2.1	Tomato	plastid	50.85	55.26
TraesCS3A01G475800.1	Wheat	cytosol	32.19	45.02
CDX70102	Canola	cytosol	59.26	44.21
Bra009158.1-P	Field mustard	cytosol	59.83	44.03
TraesCS7A01G444200.1	Wheat	plastid	35.76	41.28
TraesCS1A01G154400.2	Wheat	golgi	36.18	40.38
TraesCS1A01G233500.1	Wheat	endoplasmic reticulum, plasma membrane	33.48	39.17
TraesCS2A01G400300.1	Wheat	mitochondrion	34.9	38.64
TraesCS5A01G226900.1	Wheat	golgi	33.33	38.11
TraesCS2A01G400900.1	Wheat	golgi, mitochondrion	30.77	37.5
TraesCS4A01G458400.1	Wheat	endoplasmic reticulum, golgi	33.19	37.04
TraesCS6A01G021300.1	Wheat	cytosol	33.05	36.77
TraesCS7A01G031100.1	Wheat	endoplasmic reticulum, golgi	32.91	36.73
TraesCS6A01G256000.1	Wheat	mitochondrion	33.48	36.66
TraesCS5A01G421600.2	Wheat	endoplasmic reticulum	31.62	35.75
TraesCS1A01G297000.1	Wheat	golgi	33.76	35.64
TraesCS1A01G213400.1	Wheat	endoplasmic reticulum, golgi	30.63	35.6
TraesCS2A01G560300.1	Wheat	mitochondrion, peroxisome, plastid	37.18	35.27
TraesCS1A01G198600.1	Wheat	golgi	31.34	35.03
TraesCS4A01G163200.1	Wheat	endoplasmic reticulum	31.2	34.76
TraesCS3A01G348800.1	Wheat	golgi	34.76	34.41
TraesCS3A01G395800.1	Wheat	endoplasmic reticulum	29.91	34.31
TraesCS3A01G406100.1	Wheat	plastid	39.32	34.16
TraesCS5A01G408700.1	Wheat	mitochondrion	30.06	29.47
TraesCS4A01G220000.1	Wheat	golgi	36.32	28.52
TraesCS7A01G383700.2	Wheat	plastid	35.47	27.15
TraesCS5A01G114100.1	Wheat	endoplasmic reticulum	35.19	23.77

Protein Annotations

EnsemblPlants:TraesCS3A01G362600.1	EnsemblPlantsGene:TraesCS3A01G362600	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR10108
PANTHER:PTHR10108:SF979	PFAM:PF03141	SEG:seg	SUPFAM:SSF53335	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr3A:-:610551593..610556861

Molecular Weight (calculated)

77577.9 Da

IEP (calculated)

7.560

GRAVY (calculated)

-0.312

Length

702 amino acids

Sequence
(BLAST)

001: MKALGAHASD LLRGPHLVRA AVLFLACAAS FLVGYRWSDA SASPLFFSSV FSPASPSSRI SSRSPSVAIS PNSNISFDPS LIPAPAVAPP ASSTPNASPP
101: PPAPTPSPPP PPPVPTPSPP PPPPLQPSPP PPPARLGIVG EDGAMRDDFD IGAVVNETDL ATDEAATQEP GNAGTGGGNR ARIGKFPACP ASMREYIPCL
201: DNDEEIRRLP STERGERFER HCPAKDKALS CLVPAPKGYK APIPWPRSRD EVWFSNVPHT RLVDDKGGQN WITKAKDKFT FPGGGTQFIH GANQYLDQIS
301: QMVPDIAFGS RTRVVLDVGC GVASFGAYLL SRDVLTLSIA PKDVHENQIQ FALERGVPAM VAAFATHRLL YPSQAFEIIH CSRCRINWTR DDGILLLEVN
401: RMLRAGGYFA WAAQPVYKHE EAQQEAWKEM EDLTTRLCWE LVKKEGYVAM WRKPVNNSCY MSRDPGVKPP LCDTDDNPDN VWYVGLKACI SPLPVNSDGS
501: TPFPWPARLM EPPRRLQGVE MDAYSSKNEL FKAETKFWDD ILEGYIRVFK WKKFKLRNVM DMRAGFGGFA AALIGRKLDC WVMNVVPVTE PNTLPVIYDR
601: GLLGVAHDWC EPFDTYPRTY DLLHAFGLFS KEQKRCNASV ILLEMDRILR PGGRAYICDK KETIEEIKEI TDAMGWRSTI RDTAEGAYAS RKVLMCDKPM
701: VR

Best Arabidopsis Sequence Match ( AT2G39750.1 )
(BLAST)

001: MKPLTNGDLF KSPTLIKISA LVFVTVAFFY LGKHWSDDGY QQLVFFSSST SGSSIPEVSV SPNSNRVFNL SAIIPTNHTQ IEIPATIRQQ PPSVVADTEK
101: VKVEANPPPP PPPSPSPPPP PGPVKSFGIV DANGVMSDDF EVGEVESDTV EDWGNQTEIV EAKSDGDSKA RVRIKKFGMC PESMREYIPC LDNTDVIKKL
201: KSTERGERFE RHCPEKGKGL NCLVPPPKGY RQPIPWPKSR DEVWFSNVPH TRLVEDKGGQ NWISRDKNKF KFPGGGTQFI HGADQYLDQM SKMVSDITFG
301: KHIRVAMDVG CGVASFGAYL LSRDVMTMSV APKDVHENQI QFALERGVPA MAAAFATRRL LYPSQAFDLI HCSRCRINWT RDDGILLLEI NRMLRAGGYF
401: AWAAQPVYKH EPALEEQWTE MLNLTISLCW KLVKKEGYVA IWQKPFNNDC YLSREAGTKP PLCDESDDPD NVWYTNLKPC ISRIPEKGYG GNVPLWPARL
501: HTPPDRLQTI KFDSYIARKE LFKAESKYWN EIIGGYVRAL KWKKMKLRNV LDMRAGFGGF AAALNDHKLD CWVLSVVPVS GPNTLPVIYD RGLLGVMHDW
601: CEPFDTYPRT YDFLHASGLF SIERKRCEMS TILLEMDRIL RPGGRAYIRD SIDVMDEIQE ITKAMGWHTS LRDTSEGPHA SYRILTCEKR LLRA

Arabidopsis Description

Probable methyltransferase PMT11 [Source:UniProtKB/Swiss-Prot;Acc:O22285]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.