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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • plastid 2
  • mitochondrion 3
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d042883_P001 Maize mitochondrion, plastid 94.33 93.38
Zm00001d012400_P007 Maize plasma membrane 87.35 92.75
Os01t0846600-01 Rice mitochondrion 85.76 85.88
TraesCS3D01G356400.1 Wheat endoplasmic reticulum 84.88 83.67
TraesCS3A01G362600.1 Wheat golgi 85.17 83.48
TraesCS3B01G395100.1 Wheat plastid 85.03 82.74
HORVU3Hr1G085900.1 Barley golgi, plastid 84.3 77.54
GSMUA_Achr5P28990_001 Banana cytosol 58.72 72.53
CDY24949 Canola endoplasmic reticulum, plasma membrane 63.81 64.94
VIT_13s0019g02250.t01 Wine grape golgi 64.53 64.72
CDY07639 Canola endoplasmic reticulum 63.37 64.4
Bra000145.1-P Field mustard endoplasmic reticulum 63.23 64.16
VIT_18s0001g01600.t01 Wine grape endoplasmic reticulum, golgi, plasma membrane 61.77 63.81
KRG97843 Soybean endoplasmic reticulum 61.05 63.35
PGSC0003DMT400069783 Potato endoplasmic reticulum 62.35 63.27
KRH15065 Soybean nucleus 61.05 63.25
Solyc05g052970.2.1 Tomato endoplasmic reticulum 62.06 62.98
KRH73069 Soybean endoplasmic reticulum 60.03 62.77
AT2G39750.1 Thale cress endoplasmic reticulum, golgi 63.08 62.54
CDY20475 Canola endoplasmic reticulum, golgi 62.21 62.12
KRH31030 Soybean endoplasmic reticulum, plasma membrane 60.32 61.94
CDX98897 Canola golgi, mitochondrion 62.35 61.9
CDX74837 Canola mitochondrion 61.77 61.68
Bra005018.1-P Field mustard mitochondrion 62.06 61.53
CDX87530 Canola cytosol, golgi, peroxisome, plastid 57.99 61.48
AT5G06050.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 60.61 61.14
CDX88354 Canola cytosol, endoplasmic reticulum, golgi 57.56 61.11
PGSC0003DMT400059283 Potato cytosol 49.27 61.08
Bra015681.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 57.41 60.96
AT1G77260.1 Thale cress cytosol, endoplasmic reticulum, golgi, plastid 57.12 60.0
KRH16455 Soybean endoplasmic reticulum, golgi 56.83 59.24
KRH18054 Soybean endoplasmic reticulum, golgi 56.25 58.37
Solyc04g058180.2.1 Tomato plastid 51.31 54.64
CDX70102 Canola cytosol 61.63 45.06
Bra009158.1-P Field mustard cytosol 61.63 44.44
OQU91634 Sorghum endoplasmic reticulum, golgi 37.65 42.05
EER89033 Sorghum cytosol 34.45 38.23
KXG26943 Sorghum plastid 35.47 38.07
EER96732 Sorghum endoplasmic reticulum, golgi 34.01 37.86
OQU77908 Sorghum plasma membrane, plastid 33.58 37.2
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 31.54 37.03
EES11713 Sorghum plastid 37.94 36.97
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 32.7 36.89
EES08791 Sorghum golgi 33.14 36.13
EER93951 Sorghum peroxisome 33.28 35.95
KXG38879 Sorghum mitochondrion 31.4 35.76
EES05735 Sorghum mitochondrion, plastid 34.45 35.59
EER94413 Sorghum plasma membrane 31.54 35.4
EES03991 Sorghum plastid 38.95 33.88
OQU88046 Sorghum plastid 29.51 32.74
OQU87776 Sorghum endoplasmic reticulum, golgi 31.1 31.61
OQU77087 Sorghum mitochondrion 38.23 28.49
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 36.77 28.3
KXG23110 Sorghum endoplasmic reticulum 37.65 23.81
EER93372 Sorghum mitochondrion 31.25 16.41
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1EntrezGene:8060087UniProt:C5XPR5EnsemblPlants:EES03874ProteinID:EES03874
ProteinID:EES03874.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0008757GO:GO:0016020
GO:GO:0016021GO:GO:0016740GO:GO:0032259PFAM:PF03141PANTHER:PTHR10108PANTHER:PTHR10108:SF979
InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3003G354500SUPFAM:SSF53335TMHMM:TMhelixUniParc:UPI0001A858F9
RefSeq:XP_002458754.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:67320191..67326043
Molecular Weight (calculated)
76547.8 Da
IEP (calculated)
8.080
GRAVY (calculated)
-0.331
Length
688 amino acids
Sequence
(BLAST)
001: MKALGAHGAD LLRGPHLLRA AVLAFAVALA FLVGYHWPNA SPRLVFFSSA ASSSAPRSSS RSPAVALSPN SNISFDQSLI PTPATPPASP APNAWPPPSL
101: PPPTPAPPPP LLPPPPPARL GIVGEDGAMQ DEFDIGSIGA NDTDLATDDT APQEPSNGGA SGGPPRVRIG RFPVCPESMR EYIPCLDNEE EIKRLPSTER
201: GERFERHCPA KDKGLSCLVP APNGYKAPIP WPRSRDEVWF SNVPHTRLVD DKGGQNWITK VKDKFRFPGG GTQFIHGANQ YLDQISQMVP NVAFGSHTRV
301: VLDVGCGVAS FGAYLLSRDV LTLSIAPKDV HENQIQFALE RGVPAMVAAF ATRRLLYPSQ AFDIIHCSRC RINWTRDDGI LLLEVNRLLR AGGYFAWAAQ
401: PVYKHEEAQQ EAWKEMEDLT TRLCWELVKK EGYIAMWRKP LNNSCYMNRG PAVKPPLCDA DDNPDDVWYV SLKACISRLP ENAEAPTPVQ WPARLMEPPK
501: RLQGVEMDAY SSKNELFKAE TKFWEDIIDG YIRVFKWRKF KLRNVMDMRA GFGGFAAALI SRKLDWWVMN VVPISEPNTL PVIFDRGLLG VAHDWCEPFD
601: TYPRTYDLLH ASGLFSKEQK RCNISSILLE MDRILRPGGK AYIRDRKEVI QEIKEITNAM GWRGTIRDTA EGAYASRKVL MCDKPMGR
Best Arabidopsis Sequence Match ( AT2G39750.1 )
(BLAST)
001: MKPLTNGDLF KSPTLIKISA LVFVTVAFFY LGKHWSDDGY QQLVFFSSST SGSSIPEVSV SPNSNRVFNL SAIIPTNHTQ IEIPATIRQQ PPSVVADTEK
101: VKVEANPPPP PPPSPSPPPP PGPVKSFGIV DANGVMSDDF EVGEVESDTV EDWGNQTEIV EAKSDGDSKA RVRIKKFGMC PESMREYIPC LDNTDVIKKL
201: KSTERGERFE RHCPEKGKGL NCLVPPPKGY RQPIPWPKSR DEVWFSNVPH TRLVEDKGGQ NWISRDKNKF KFPGGGTQFI HGADQYLDQM SKMVSDITFG
301: KHIRVAMDVG CGVASFGAYL LSRDVMTMSV APKDVHENQI QFALERGVPA MAAAFATRRL LYPSQAFDLI HCSRCRINWT RDDGILLLEI NRMLRAGGYF
401: AWAAQPVYKH EPALEEQWTE MLNLTISLCW KLVKKEGYVA IWQKPFNNDC YLSREAGTKP PLCDESDDPD NVWYTNLKPC ISRIPEKGYG GNVPLWPARL
501: HTPPDRLQTI KFDSYIARKE LFKAESKYWN EIIGGYVRAL KWKKMKLRNV LDMRAGFGGF AAALNDHKLD CWVLSVVPVS GPNTLPVIYD RGLLGVMHDW
601: CEPFDTYPRT YDFLHASGLF SIERKRCEMS TILLEMDRIL RPGGRAYIRD SIDVMDEIQE ITKAMGWHTS LRDTSEGPHA SYRILTCEKR LLRA
Arabidopsis Description
Probable methyltransferase PMT11 [Source:UniProtKB/Swiss-Prot;Acc:O22285]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.