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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • plastid 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:plastid
PProwler:secretory
TargetP:plastid
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002625_P003 Maize mitochondrion 96.1 96.55
HORVU2Hr1G095070.1 Barley cytosol 61.31 90.76
Os04t0570800-02 Rice golgi 87.52 86.84
TraesCS2B01G418400.1 Wheat golgi 85.34 85.74
TraesCS2D01G397900.1 Wheat mitochondrion 85.18 85.58
TraesCS2A01G400300.1 Wheat mitochondrion 84.56 85.49
GSMUA_Achr5P13670_001 Banana plastid 69.11 74.45
EES05735 Sorghum mitochondrion, plastid 76.6 73.72
GSMUA_Achr11P... Banana cytosol, endoplasmic reticulum, golgi 60.53 73.07
KRH00647 Soybean cytosol 59.75 71.06
GSMUA_Achr5P03280_001 Banana plastid 61.0 68.12
CDY01971 Canola endoplasmic reticulum, extracellular 43.06 66.35
VIT_15s0048g01940.t01 Wine grape mitochondrion 63.81 64.72
KRH40534 Soybean endoplasmic reticulum, mitochondrion, vacuole 62.56 64.47
PGSC0003DMT400071370 Potato endoplasmic reticulum, golgi 63.81 64.31
PGSC0003DMT400037042 Potato plastid 64.74 64.14
VIT_16s0100g00570.t01 Wine grape mitochondrion 65.37 63.87
KRG91450 Soybean mitochondrion 59.75 63.83
Solyc01g091690.2.1 Tomato plastid 63.18 63.68
KRH09116 Soybean endoplasmic reticulum 62.71 63.61
Solyc03g026120.2.1 Tomato plastid 64.27 63.38
KRH38569 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 62.56 63.35
PGSC0003DMT400065051 Potato plastid 64.43 63.15
Solyc06g035790.2.1 Tomato plastid 64.12 63.13
Bra008529.1-P Field mustard mitochondrion 60.53 62.48
PGSC0003DMT400030542 Potato plastid 61.93 62.32
Solyc01g009600.2.1 Tomato plastid 61.62 62.3
CDY54063 Canola mitochondrion 53.82 62.27
AT4G00750.1 Thale cress mitochondrion 61.0 61.77
AT2G45750.1 Thale cress endoplasmic reticulum, golgi 60.22 61.17
CDY18904 Canola endoplasmic reticulum 60.22 60.98
Bra004933.1-P Field mustard cytosol, endoplasmic reticulum, mitochondrion, plastid 59.75 60.6
CDX74761 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 59.75 60.6
EER89033 Sorghum cytosol 58.35 60.32
CDY37061 Canola endoplasmic reticulum, golgi, mitochondrion, plastid 58.97 60.19
KRH48242 Soybean endoplasmic reticulum 60.06 60.06
Bra039319.1-P Field mustard golgi 58.66 59.49
EER93951 Sorghum peroxisome 58.97 59.34
EER96732 Sorghum endoplasmic reticulum, golgi 54.76 56.8
EER94782 Sorghum endoplasmic reticulum, golgi, vacuole 52.89 55.57
KXG38879 Sorghum mitochondrion 51.79 54.97
EES08791 Sorghum golgi 50.39 51.19
KXG26938 Sorghum endoplasmic reticulum, golgi, mitochondrion, plastid 40.87 44.71
EER94413 Sorghum plasma membrane 41.19 43.07
OQU88046 Sorghum plastid 38.69 40.0
OQU91634 Sorghum endoplasmic reticulum, golgi 36.51 37.99
CDY27362 Canola plasma membrane 58.97 37.46
EES03874 Sorghum mitochondrion 38.07 35.47
OQU77908 Sorghum plasma membrane, plastid 32.29 33.33
EES11713 Sorghum plastid 36.04 32.72
OQU87776 Sorghum endoplasmic reticulum, golgi 31.67 29.99
EES03991 Sorghum plastid 36.51 29.58
EES08114 Sorghum golgi, mitochondrion, plastid, vacuole 35.41 25.39
OQU77087 Sorghum mitochondrion 34.95 24.27
KXG23110 Sorghum endoplasmic reticulum 34.95 20.59
EER93372 Sorghum mitochondrion 30.11 14.73
Protein Annotations
Gene3D:3.40.50.150MapMan:35.1UniProt:A0A1B6PMR8GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0008168GO:GO:0016020GO:GO:0016021GO:GO:0016740
GO:GO:0032259EnsemblPlants:KXG26943ProteinID:KXG26943ProteinID:KXG26943.1PFAM:PF03141PANTHER:PTHR10108
PANTHER:PTHR10108:SF856InterPro:Put_SAM_MeTrfaseInterPro:SAM-dependent_MTasesEnsemblPlantsGene:SORBI_3006G184100SUPFAM:SSF53335TMHMM:TMhelix
UniParc:UPI0001C8063ASEG:seg::::
Description
hypothetical protein
Coordinates
chr6:-:53915884..53919727
Molecular Weight (calculated)
70937.0 Da
IEP (calculated)
7.681
GRAVY (calculated)
-0.216
Length
641 amino acids
Sequence
(BLAST)
001: MAVGATATKL HLSSAAAAAR RPSLLHLAAV AVLCSVSYLL GIWHHGGFSA GPAAAGGGVS SSVSIATAVS CATPALTTAS SSPPAGPLDF AAHHTAEGTE
101: AEAALRHRSY EACPAKYSEY TPCEDVERSL RFPRDRLVYR ERHCPADGER LRCLVPAPKG YRNPFPWPAS RDVAWFANVP HKELSVEKAV QNWIRVDGDR
201: FRFPGGGTMF PRGAGAYIDD IGKLIPLHDG SIRTALDTGC GVASWGAYLL SRNILAMSFA PRDSHEAQVQ FALERGVPAM IGVLASNRLT YPARSFDMAH
301: CSRCLIPWQL YDGLYLIEVD RILRPGGYWI LSGPPINWKK HWKGWDRTKE DLDAEQKAIE SVAKSLCWKK IKEEGDIAIW QKPTNHIHCK AIHKVIKSPP
401: FCSNQNPDAA WYDKMEACIT PLPEVSDLKE VAGGALKKWP ERLTAVPPRI ASGSIEGVTE EMFVEDTELW KKRVGHYKSV IAQLGQKGRY RNLLDMNAKF
501: GGFAAALVND PLWVMNMVPT VGNSTTLGVI YERGLIGSYQ DWCEGMSTYP RTYDLIHADS VFTLYNGRCE AENILLEMDR ILRPEGTVII RDDVDLLVKI
601: KSITDGMRWN SQIVDHEDGP LVREKLLLVV KTYWTLDDNK Q
Best Arabidopsis Sequence Match ( AT4G00750.1 )
(BLAST)
001: MGNYRWPSKL SKLSLRAKQT NLYRVILIAI LCVTFYFVGV WQHSGRGISR SSISNHELTS VPCTFPHQTT PILNFASRHT APDLPPTITD ARVVQIPSCG
101: VEFSEYTPCE FVNRSLNFPR ERLIYRERHC PEKHEIVRCR IPAPYGYSLP FRWPESRDVA WFANVPHTEL TVEKKNQNWV RYEKDRFLFP GGGTMFPRGA
201: DAYIDEIGRL INLKDGSIRT AIDTGCGVAS FGAYLMSRNI VTMSFAPRDT HEAQVQFALE RGVPAIIGVL ASIRLPFPAR AFDIAHCSRC LIPWGQYNGT
301: YLIEVDRVLR PGGYWILSGP PINWQRHWKG WERTRDDLNS EQSQIERVAR SLCWRKLVQR EDLAVWQKPT NHVHCKRNRI ALGRPPFCHR TLPNQGWYTK
401: LETCLTPLPE VTGSEIKEVA GGQLARWPER LNALPPRIKS GSLEGITEDE FVSNTEKWQR RVSYYKKYDQ QLAETGRYRN FLDMNAHLGG FASALVDDPV
501: WVMNVVPVEA SVNTLGVIYE RGLIGTYQNW CEAMSTYPRT YDFIHADSVF SLYKDRCDME DILLEMDRIL RPKGSVIIRD DIDVLTKVKK ITDAMQWEGR
601: IGDHENGPLE REKILFLVKE YWTAPAPDQS SDP
Arabidopsis Description
Probable methyltransferase PMT15 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.