Factsheet for VIT_16s0100g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G095070.1	Barley	cytosol	49.09	74.36
PGSC0003DMT400037042	Potato	plastid	71.34	72.33
Solyc03g026120.2.1	Tomato	plastid	71.19	71.85
PGSC0003DMT400065051	Potato	plastid	70.58	70.8
Solyc06g035790.2.1	Tomato	plastid	69.82	70.35
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, golgi	55.95	69.11
KRH38569	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	66.01	68.4
KRG91450	Soybean	mitochondrion	62.5	68.33
VIT_15s0048g01940.t01	Wine grape	mitochondrion	65.4	67.88
KRH09116	Soybean	endoplasmic reticulum	65.24	67.72
GSMUA_Achr5P13670_001	Banana	plastid	60.82	67.06
Solyc01g009600.2.1	Tomato	plastid	64.79	67.03
PGSC0003DMT400030542	Potato	plastid	64.94	66.88
KXG26943	Sorghum	plastid	63.87	65.37
TraesCS2A01G400300.1	Wheat	mitochondrion	62.65	64.83
TraesCS2D01G397900.1	Wheat	mitochondrion	62.96	64.73
Zm00001d002625_P003	Maize	mitochondrion	62.65	64.42
TraesCS2B01G418400.1	Wheat	golgi	62.65	64.42
Zm00001d026079_P001	Maize	plastid	62.65	64.12
Os04t0570800-02	Rice	golgi	62.96	63.93
Os02t0675700-01	Rice	mitochondrion	62.8	63.78
TraesCS6D01G237200.1	Wheat	golgi	62.2	63.45
TraesCS6A01G256000.1	Wheat	mitochondrion	61.89	63.34
TraesCS6B01G269400.1	Wheat	mitochondrion, plastid	61.89	63.14
HORVU6Hr1G065360.4	Barley	mitochondrion	61.74	62.79
GSMUA_Achr5P03280_001	Banana	plastid	54.57	62.37
Zm00001d051442_P002	Maize	plasma membrane	60.37	61.21
VIT_02s0025g03200.t01	Wine grape	cytosol	58.54	60.76
EES05735	Sorghum	mitochondrion, plastid	60.21	59.31
VIT_02s0012g00580.t01	Wine grape	endoplasmic reticulum, golgi	53.05	56.96
VIT_17s0000g06050.t01	Wine grape	cytosol	52.29	56.23
VIT_01s0026g02340.t01	Wine grape	golgi	52.44	54.09
VIT_05s0124g00530.t01	Wine grape	endoplasmic reticulum, golgi, mitochondrion, vacuole	46.95	50.08
VIT_02s0033g01120.t01	Wine grape	cytosol	40.85	44.67
VIT_04s0023g02790.t01	Wine grape	cytosol	33.23	43.08
VIT_15s0048g01990.t01	Wine grape	mitochondrion	38.72	42.55
VIT_05s0049g01180.t01	Wine grape	endoplasmic reticulum, golgi	36.74	39.38
VIT_07s0005g03630.t01	Wine grape	endoplasmic reticulum, golgi	36.43	38.55
VIT_18s0001g01600.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	36.43	35.89
VIT_13s0067g01690.t01	Wine grape	endoplasmic reticulum, golgi	32.77	35.48
VIT_08s0007g05750.t01	Wine grape	endoplasmic reticulum, plasma membrane	32.16	35.11
VIT_13s0019g02250.t01	Wine grape	golgi	35.98	34.4
VIT_04s0044g01670.t01	Wine grape	cytosol	34.15	27.15
VIT_18s0001g12470.t01	Wine grape	mitochondrion	29.57	26.8
VIT_18s0001g01270.t01	Wine grape	plasma membrane	34.6	25.85

Protein Annotations

EntrezGene:100258938	wikigene:100258938	Gene3D:3.40.50.150	MapMan:35.1	ProteinID:CBI31829	ProteinID:CBI31829.3
UniProt:D7TMV6	EMBL:FN596000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008757
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0032259	EntrezGene:LOC100258938	wikigene:LOC100258938
PFAM:PF03141	PANTHER:PTHR10108	PANTHER:PTHR10108:SF1049	InterPro:Put_SAM_MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
TIGR:TC53259	TMHMM:TMhelix	UniParc:UPI00015CCB60	ArrayExpress:VIT_16s0100g00570	EnsemblPlantsGene:VIT_16s0100g00570	EnsemblPlants:VIT_16s0100g00570.t01
unigene:Vvi.8113	RefSeq:XP_002279420	RefSeq:XP_002279420.2	:	:	:

Description

No Description!

Coordinates

chr16:+:16062537..16066024

Molecular Weight (calculated)

74639.2 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.385

Length

656 amino acids

Sequence
(BLAST)

001: METPNKKWKK QTQIAKRLFL AMPSAKPSST FSFCTKTNIY SLAVITFFCS FSYFLGSWQH GRGTTSTTAE FSLRGRCNPS QNSTNTALND PFLAQLSIDF
101: STHHAAEDGV ATVPEEKVKS YPACGVEYSE YTPCEGTKRA LKFERERLIY RERHCPEKGD LLKCRIPAPY GYRNPPAWPA SRDVAWYANV PHKELTVEKA
201: VQNWIIYEGD RFRFPGGGTM FPNGADAYID DIGKLINLKD GSIRTAIDTG CGVASWGAYL LSRNIITMSF APRDTHEAQV QFALERGVPA LIGVLASIRL
301: PYPSRAFDMA HCSRCLIPWG QYDGVYLIEV DRVLRPGGYW VLSGPPINWK KHWRGWERTE KDLKAEQQTI ENVAKSLCWK KLVEKDDIAI WQKPINHLYC
401: KVNRKITQNP PFCLPQDPDR AWYTKMETCL TPLPEVSYSQ ELAGGELAKW PERLNVIPPR ISSGSINGVT AEIFQLNSEL WKKRMSYYKA VNNQLRQPGR
501: YRNLLDMNAY LGGFAAALVE DPVWVMNVVP VDAKINTLGV IYERGLIGTY QNWCEAMSTY PRTYDLIHAD SVFSLYKDRC EMEDILLEMD RILRPEGSVI
601: LRDDVDVLVK IKRITDGLNW MSRIVDHEDG PHQREKLLFA VKSYWTAPAA ADQEGS

Best Arabidopsis Sequence Match ( AT4G00750.1 )
(BLAST)

001: MGNYRWPSKL SKLSLRAKQT NLYRVILIAI LCVTFYFVGV WQHSGRGISR SSISNHELTS VPCTFPHQTT PILNFASRHT APDLPPTITD ARVVQIPSCG
101: VEFSEYTPCE FVNRSLNFPR ERLIYRERHC PEKHEIVRCR IPAPYGYSLP FRWPESRDVA WFANVPHTEL TVEKKNQNWV RYEKDRFLFP GGGTMFPRGA
201: DAYIDEIGRL INLKDGSIRT AIDTGCGVAS FGAYLMSRNI VTMSFAPRDT HEAQVQFALE RGVPAIIGVL ASIRLPFPAR AFDIAHCSRC LIPWGQYNGT
301: YLIEVDRVLR PGGYWILSGP PINWQRHWKG WERTRDDLNS EQSQIERVAR SLCWRKLVQR EDLAVWQKPT NHVHCKRNRI ALGRPPFCHR TLPNQGWYTK
401: LETCLTPLPE VTGSEIKEVA GGQLARWPER LNALPPRIKS GSLEGITEDE FVSNTEKWQR RVSYYKKYDQ QLAETGRYRN FLDMNAHLGG FASALVDDPV
501: WVMNVVPVEA SVNTLGVIYE RGLIGTYQNW CEAMSTYPRT YDFIHADSVF SLYKDRCDME DILLEMDRIL RPKGSVIIRD DIDVLTKVKK ITDAMQWEGR
601: IGDHENGPLE REKILFLVKE YWTAPAPDQS SDP

Arabidopsis Description

Probable methyltransferase PMT15 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.